Pairwise Alignments

Query, 300 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas sp. BP01

 Score =  200 bits (508), Expect = 4e-56
 Identities = 109/293 (37%), Positives = 175/293 (59%), Gaps = 6/293 (2%)

Query: 5   RAWEMRVFLRVAVQGSFSAAGRDVGMTPSSTAKLVGRLEERLGVRLVERSTRKLRLTAEG 64
           R+ E++VF+ V   GS SAA   +G TPS+ ++ + RLE +LG  LV R+TR++ LT EG
Sbjct: 4   RSEELQVFVAVIDCGSISAAAEQMGQTPSAVSRTLSRLEGKLGTTLVNRTTRRMDLTEEG 63

Query: 65  ELYRERAQALLGELDALDAEIAGGARAPTGLIRANASVPFGQHCLLPLLPEFLRDHPGIT 124
             + ER++ +L ++D ++  ++   + PTG +R NA+ PF  H +LP + EF R++PGI 
Sbjct: 64  RYFLERSRLILEQMDEMEERLSMNHQTPTGRLRINAAAPFMLHAILPWIGEFRREYPGIE 123

Query: 125 MDVTMTDEVVDLYAARVDVAFRAGPLSDSALLAQRLGVVRRRIVASPAYLDRKGVPTTAA 184
           +++   D ++DL     DVA R G L+DS+L A+ LG    +++ASPAYL++ G P    
Sbjct: 124 LELNTDDLIIDLLEQSTDVAIRIGELADSSLHARNLGCSPVQVLASPAYLEQHGTPQRVE 183

Query: 185 DLEAHDCLGFNFRRAAAVWPLK--SGGRLVDREVPTRILANNGETVRHMALLGLGLARLA 242
           DL  H  LGF+   +   WPL+   G R     +   ++A++GET+R +AL G G+  L+
Sbjct: 184 DLANHCLLGFSQPESLNHWPLRHAQGDRF---SIRPALIASSGETLRQLALAGEGIVSLS 240

Query: 243 EYHVRDDLREGRLVAVLDDTLVD-TEEIHAVYTGRDRAPRRVRAFLDHMAPRL 294
            +   +D+R GRL  +L +      + IHAVY    +   R++ FLD +  +L
Sbjct: 241 HFMTHEDIRAGRLQVLLAEANNGYRQPIHAVYYRNTQLALRIQCFLDFIQRKL 293