Pairwise Alignments

Query, 300 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 315 a.a., DNA-binding transcriptional LysR family regulator from Paraburkholderia graminis OAS925

 Score =  194 bits (494), Expect = 2e-54
 Identities = 113/308 (36%), Positives = 173/308 (56%), Gaps = 20/308 (6%)

Query: 8   EMRVFLRVAVQGSFSAAGRDVGMTPSSTAKLVGRLEERLGVRLVERSTRKLRLTAEGELY 67
           E+ VF+ V   GS +AA   +G T S  ++ + RLE++L   LV R+TR+L+LT EGE +
Sbjct: 7   ELLVFVSVIDSGSITAAAEKLGQTVSGVSRALTRLEKKLDTALVRRTTRRLQLTEEGEGF 66

Query: 68  RERAQALLGELDALDAEIAGGARAPTGLIRANASVPFGQHCLLPLLPEFLRDHPGITMDV 127
            +RA+A+L  ++  +  +A   R P+G +R +A+ PF  HC+ P +  F   +P I +++
Sbjct: 67  LQRARAILDAMEEAEESVARKRRRPSGRLRVDAASPFMLHCIAPHMTAFSALYPEIRLEL 126

Query: 128 TMTDEVVDLYAARVDVAFRAGPLSDSALLAQRLGVVRRRIVASPAYLDRKGVPTTAADLE 187
           T ++ +VDL   +VD+A R G L DS L A+ LG  + R+VASPAYL   G P T   L 
Sbjct: 127 TSSERIVDLLEQKVDIAIRIGALQDSTLHARALGSSKLRVVASPAYLAEHGEPKTVDALR 186

Query: 188 AHDCLGFNFRRAAAVWPL-------------------KSGGRLVDREVPTRILANNGETV 228
            H  +GF        WPL                   ++GG+    ++   I A++GET+
Sbjct: 187 EHRLIGFTAPEHLNRWPLRERGKRAGKGTSKSTSRTDRAGGKPEPLKIQPSITASSGETL 246

Query: 229 RHMALLGLGLARLAEYHVRDDLREGRLVAVLDDTLVDTEE-IHAVYTGRDRAPRRVRAFL 287
           R +AL G G+A LA++    D+R+GRLV +L   L+D  + + AVY        RV+ FL
Sbjct: 247 RQLALSGWGIACLADFMTAADIRDGRLVPILGHVLLDERQPVSAVYYQSASLAGRVQCFL 306

Query: 288 DHMAPRLR 295
           D +A R+R
Sbjct: 307 DFIAARVR 314