Pairwise Alignments

Query, 481 a.a., DNA-binding transcriptional regulator NtrC from Azospirillum sp. SherDot2

Subject, 466 a.a., nitrogen regulation protein NR(I) from Vibrio cholerae E7946 ATCC 55056

 Score =  371 bits (953), Expect = e-107
 Identities = 208/473 (43%), Positives = 298/473 (63%), Gaps = 9/473 (1%)

Query: 1   MSAATILIADDDRAIRTVLTQALARLGHEVRTTGNAATLWRWVADGQGDLVITDVVMPDE 60
           MS   + + DDD +IR V+ + L+    +  T  +A ++   +     D++++D+ MP  
Sbjct: 1   MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGM 60

Query: 61  NGLDLIPRIKKLRPEMRVIVMSAQNTLITAVKAAERGAFEYLPKPFDLKELVSVVERALN 120
           +G+ L+ ++ +  PE+ VI+M+A + L  AV A ++GAFEYLPKPFD+ E +++VERA+ 
Sbjct: 61  DGIALLNQVHQRTPELPVIIMTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIA 120

Query: 121 TNTPPAAMPGGDMESEEQLPLIGRSPAMQEIYRVLARLMGTDLTVMITGESGTGKELVAR 180
                        E+     +IG +PAMQE++R + RL  + ++V+I GESGTGKELVA 
Sbjct: 121 HGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGESGTGKELVAH 180

Query: 181 ALHDYGKRRNGAFVAINMAAIPRELIESELFGHEKGAFTGATNRSTGRFEQAQGGTLFLD 240
           ALH +  R    F+A+NMAAIP++LIESELFGHEKGAFTGA     GRFEQA GGTLFLD
Sbjct: 181 ALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD 240

Query: 241 EIGDMPLDAQTRLLRVLQEGEYTTVGGRTAIKTDVRIIAATHRDLRTLIRQGLFREDLFY 300
           EIGDMPLD QTRLLRVL +G++  VGG  AIK DVRI+AATH++L  L+ QG FREDLF+
Sbjct: 241 EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFH 300

Query: 301 RLCVVPIRLPPLRERTEDIPLLVRHFLNLGISQ-GLPAKSIDQAAMDRLKRYRWPGNVRE 359
           RL V+ I +P LRER +DI  L +HFL L   + G+  K+++   +D L +  WPGNVR+
Sbjct: 301 RLNVIRIHIPSLRERRQDIEKLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQ 360

Query: 360 LENLVRRLAALYSQEVIGLDVVEAELADATPAAQPVEEPQSEGLSSAVERHLKDYFAAHK 419
           LEN+ R L  + S    G +V+ ++L    P+    E   S   +    +   + +A   
Sbjct: 361 LENMCRWLTVMAS----GSEVLPSDL----PSELLSERKASHFDNDISWQKQLETWAKSA 412

Query: 420 DGMPSNGLYDRVLREIERPLISLSLSATRGNQIKAAQLLGLNRNTLRKKIRDL 472
                  L    L E ER L+  +L  T G++ +AA++LG  RNTL +K+++L
Sbjct: 413 LASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 465