Pairwise Alignments

Query, 390 a.a., Bifunctional enzyme IspD/IspF from Azospirillum sp. SherDot2

Subject, 398 a.a., bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Rhodopseudomonas palustris CGA009

 Score =  404 bits (1038), Expect = e-117
 Identities = 216/388 (55%), Positives = 269/388 (69%), Gaps = 5/388 (1%)

Query: 6   APTCIALIVAGGSGQRFGAERPKQYLDLAGKPVLRRTVEAFLGHPQVTGVRVVIDPAWRD 65
           +P   A+IVA G G R GA  PKQY  LAG+PV+ R +E F  HP V  V+ V +P   +
Sbjct: 4   SPRTAAIIVAAGRGLRAGAGGPKQYRSLAGRPVIARAMEPFCTHPGVMAVQPVTNPDDTE 63

Query: 66  AYDATLSGLALPDPVAGGASRQDSVRNGLEALATDGAPDLVLIHDAARPLIDADTIAAVI 125
            ++A ++GL     V GGA+RQ SVR GLEALA +  PD+VLIHDAAR  +  + I+  I
Sbjct: 64  MFNAAVAGLNFRPAVGGGATRQASVRAGLEALA-ELKPDIVLIHDAARCFVTPELISRAI 122

Query: 126 AALDSTPGAIAAVPVADTLKR-GSGDAITGTVDRDGLWRAQTPQGFRFPDILEAHRAAMG 184
            A  +T  A+  VPV DT+K+  S  A+  T DR  L  AQTPQ FRF  IL+AHR A  
Sbjct: 123 TAAGATGAALPVVPVTDTIKQVDSSGAVDATPDRASLRIAQTPQAFRFDVILDAHRRAAS 182

Query: 185 LS---LTDDAAVAERAGLTVALVPSKEDNFKVTTPDDLTRATRAIMSSLWDVRTGSGFDV 241
                 TDDAA+AE AGLTV+      +N K+TTP+D  R    +M++L D+RTG+G+DV
Sbjct: 183 GGRDDFTDDAAIAEWAGLTVSTFEGDANNMKMTTPEDFAREESRLMAALGDIRTGTGYDV 242

Query: 242 HRFTDGDFVMLCGLRVPHSHGLEGHSDADVGLHALTDAILGALAAGDIGSHFPPTDPRWR 301
           H F +GD V LCGL+VPH+ G   HSD DVGLHAL DAILGALA GDIGSHFPPTDP+W+
Sbjct: 243 HAFGEGDHVWLCGLKVPHTRGFLAHSDGDVGLHALVDAILGALADGDIGSHFPPTDPQWK 302

Query: 302 GADSAKFLRHAADLVAERGGVIAHADVTVICERPKVGPHRAAMADRIAQILGIEVGRVSV 361
           GA S KFL++A D V  RGG +A+ +VT+ICERPK+GP R AM  RIA+I G+ V RV+V
Sbjct: 303 GAASDKFLKYAIDRVTARGGRVANLEVTMICERPKIGPLRDAMRQRIAEITGVPVSRVAV 362

Query: 362 KATTTEQLGFTGRREGIAAQAVATVRLP 389
           KATT+E+LGFTGR EGIAA A AT+RLP
Sbjct: 363 KATTSEKLGFTGREEGIAATASATIRLP 390