Pairwise Alignments

Query, 396 a.a., Ribonuclease D from Azospirillum sp. SherDot2

Subject, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (447), Expect = 8e-49
 Identities = 124/376 (32%), Positives = 192/376 (51%), Gaps = 21/376 (5%)

Query: 3   LITTTDALQAFCQSLAGTEYITVDTEFLREKTYWPQLCLVQVGGPNGAVAIDPLAEGIDL 62
           +I+    LQ  C +    + + +DTEF+R +T++PQL L+Q+        IDP     ++
Sbjct: 13  IISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD-EM 71

Query: 63  APLFALMSDPSVLKVFHAARQDVEIFWHLSGQIPHPLFDTQVAAMVCGFGESVGYETLVT 122
            P   L+ D SVLKV HA  +D+E+F +  G  P P+ DTQ+ A   G+G S G+  LV 
Sbjct: 72  TPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQ 131

Query: 123 KLAGARIDKSSRFTDWSHRPLTERQLTYALSDVIHLRPAYEKLKRRLARSGRSHWLEEEM 182
                 +DKS   TDW  RPL+++QL YA +DV +L P YEKL  ++ ++G      +E 
Sbjct: 132 DQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQES 191

Query: 183 AILTDPATYQVDPESSYLRLKVRTN-KPRFMAILKELAAWREREAQRRDQPRSRILRDEA 241
            +     T   +PE +YL +K     KP+ +AILK LA WR  EA  RD   + ++++  
Sbjct: 192 ELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETD 251

Query: 242 LLEI---AAHAPTTVDDLARTRGLGRGFAEGRQGADVLAAVKGGLDLP-DSALPRVEPRE 297
           LL I   A  +P  +++     G+    A  R  + ++A VK  L+ P D+  P + P  
Sbjct: 252 LLTISRLALRSPKRMEE----EGVD-PHAIRRHSSKIIAMVKTALETPADAYPPEIVPIM 306

Query: 298 EPPPGLQPIVELLRVLLKMKCDENNVAAKLVASSADLEALAA-------DDGADIAAMQG 350
           E  PG + + + L+  +K   + + +A + +AS   L  L +       D       MQG
Sbjct: 307 E-YPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQG 365

Query: 351 WRRELFGN--DALALK 364
           WR  L G   + L LK
Sbjct: 366 WRLPLLGEKLNTLVLK 381