Pairwise Alignments

Query, 527 a.a., ATP-dependent RNA helicase RhlE from Azospirillum sp. SherDot2

Subject, 520 a.a., RNA helicase from Herbaspirillum seropedicae SmR1

 Score =  354 bits (909), Expect = e-102
 Identities = 198/432 (45%), Positives = 258/432 (59%), Gaps = 11/432 (2%)

Query: 1   MLFSELGLGPDVLRAIEDKGYTQPTPIQEQAIPCVLQRRDVLGCAQTGTGKTASFTLPMI 60
           M FS LGL  +++RA+ ++GYT PTPIQ QA+P VL   D+L  AQTGTGKTA FTLP++
Sbjct: 1   MSFSALGLSDEIVRAVSEQGYTSPTPIQAQAVPAVLSGGDLLAGAQTGTGKTAGFTLPLL 60

Query: 61  DILAS---GRARARMP-RSLILEPTRELAAQVSESFETYGKYHKLSMALLIGGETFTEQV 116
             L++    +    +P R+LIL PTRELAAQV ES   YGKY  L+ A + GG     Q+
Sbjct: 61  QRLSAMPRQKINGHVPIRALILAPTRELAAQVEESVRQYGKYLPLTSACIFGGVGINPQI 120

Query: 117 KKLDRGVDVLIATPGRLIDLFERGNIMLNDIKVFVIDEADRMLDMGFIPDIERIVSKLPK 176
             L RGVD+L+ATPGRL+D  ++G + L  I++ V+DEADRMLDMGFI DI ++++ LP 
Sbjct: 121 TLLKRGVDILVATPGRLLDHMQQGTVNLQHIQILVLDEADRMLDMGFIRDIRKVLAALPP 180

Query: 177 NRQTLFFSATMPPEIRRLADAFLTQPLEISVAPPASPAETVTQALSLVHEMDKRKALRHL 236
            RQ L FSAT   EI++LAD+ L  P  I VA   S  E + Q +  V    K   L HL
Sbjct: 181 KRQNLLFSATFADEIKKLADSLLNNPALIEVARRNSTVEVIAQKIHPVDRDKKHPMLAHL 240

Query: 237 LQTEDVKNAFIFCNRKRDIAVLQKSLERHGFNVGALHGDMVQSKRTETLERFKQGEITLL 296
           ++T   K   +F   K     L + L R G    A+HG+  QS RT+ L  FK G++T L
Sbjct: 241 IKTHQWKQVLVFTRTKHGANKLVEQLGRDGITAMAIHGNKSQSARTKALAEFKDGKLTAL 300

Query: 297 VCSDVAARGIDVQGLSHVFNFDVPLTPDDYVHRIGRTGRAGKQGRAFMLATPDDTKLVGA 356
           + +D+AARGID+  L HV N+D+P  P+DYVHRIGRTGRAG  G A  L   D+  L+  
Sbjct: 301 IATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGATGEAVSLVCIDERDLLHD 360

Query: 357 ITRLIKREIPMIAIDGLETAEFGEED----SSSRGRGRGRGGRGAKPDSRSEARPPRGAR 412
           I R IKREIP+  I G E     +       S +GR +  GGRG +   RS  R P    
Sbjct: 361 IERFIKREIPVEVIAGFEPDPTAKPQPIQLRSGQGRHQNGGGRGGQ---RSAPRKPAANG 417

Query: 413 EERAPREEAAPP 424
              A   + A P
Sbjct: 418 NGNAAAAKPAKP 429