Pairwise Alignments

Query, 253 a.a., Transcriptional regulatory protein OmpR from Azospirillum sp. SherDot2

Subject, 241 a.a., transcriptional regulatory protein OmpR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  135 bits (341), Expect = 6e-37
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 12/237 (5%)

Query: 6   IVVVEDENSLRSDMVEYLSSCGFDAIGARDGTELDRLLQTRTAAIVILDVNLPDEDGFKI 65
           I+VV+D+  LR+ +  YL   G+    A +  ++DRLL+     +++LD+ LP EDG  I
Sbjct: 8   ILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLLERENFHLIVLDLMLPGEDGLSI 67

Query: 66  AARLRDHHGA-GIIMVTARSSTVDRIVGLEIGADAYLVKPVELRELEAQVKSLLRRLSER 124
             RLR       I+M+TA+   VDRI+GLE+GAD YL KP   REL A++K+++RR ++ 
Sbjct: 68  CRRLRQQGSTIPIVMLTAKGDEVDRIIGLELGADDYLPKPFNPRELLARIKAVMRRQTQD 127

Query: 125 AAESAAQSANGAASGEAAGDGADEARWSLDPTEWSLTNPAGIRIGLTSMEMKLTSLLAAQ 184
              + AQ       GE + D A    +  D             I LTS E  +  +L   
Sbjct: 128 VPGAPAQQEAEIRFGEFSLDLATREMYHGDEA-----------IVLTSGEFAVLKVLVTH 176

Query: 185 ARKPATRDQISQALYNRRWNPEDRSIDTVVGRLRHKVEGAIGGPAPLKSVHGVGYVF 241
            R+P +RD++      R ++  +RSID  V RLR  +E     P  +++V G+GYVF
Sbjct: 177 PREPLSRDKLMNLARGRDYSALERSIDVQVSRLRRLIEKDPANPRYIQTVWGLGYVF 233