Pairwise Alignments

Query, 667 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (344), Expect = 2e-36
 Identities = 105/373 (28%), Positives = 179/373 (47%), Gaps = 44/373 (11%)

Query: 308 ALAAGTILSILIARSLTGPIAATTAAVQRLSDGDLTVAVPNTGRQDELGSIGRAVATVIQ 367
           AL   T L++LIA+ +   +    ++   ++ GDLT  +P TG  DE   I + V  ++ 
Sbjct: 254 ALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTG-NDEFSDIAKYVNRIVT 312

Query: 368 VLHGLHGEMHRLSGKPVDSLEAVGTQQAPDFHGAYGEMVALLQETGTAFRTIGEQATQVA 427
                      +      S+ A+ T        A  E  A+  +T         Q  Q+A
Sbjct: 313 -------SFQEVISSNRHSVSALAT--------AAEENAAVAMQTKQNIVEQQSQTQQIA 357

Query: 428 VAAGQASTAIAHVSDGASEQTDDLDQVATAVGQSARAIVHVTDSTRDASDMVKDAADFAD 487
            A  Q  TA  H             +VA + G +A A      +      +V++     +
Sbjct: 358 AAIHQ-FTATVH-------------EVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIE 403

Query: 488 GGRQDMARLLRVSQTIADNSRRIGRITEAITQIAVKTNILSVNASIEAARAGEQGKGFEV 547
           G   D+ ++L   Q +A +S  IG + + I  I+ +TN+L++NA+IEAARAGEQG+GF V
Sbjct: 404 GLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAV 463

Query: 548 VAEEVGKLADNAVESARQIAEIIEA-------AAALAEEGKAVTEQA--RRRMDGLA--- 595
           VA+EV  LA    ES +QI + ++        +A L E+G +   +A  + R+ G A   
Sbjct: 464 VADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQ 523

Query: 596 --ERVDRIDGAFQSVAVAMEEQQASVREIERSVESVRTVASKNAAASEEIAATMVHLSRL 653
               VDRI      +A A EEQ A   EI +++ ++  ++++ A  +++ +   + L+RL
Sbjct: 524 ITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARL 583

Query: 654 ADETRRQVSRFQA 666
           A+  +++V+R+ A
Sbjct: 584 AESMQQEVARYNA 596