Pairwise Alignments

Query, 183 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 168 a.a., RNA polymerase subunit sigma-24 from Pseudomonas fluorescens FW300-N2C3

 Score =  115 bits (287), Expect = 5e-31
 Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 4/165 (2%)

Query: 19  DRAIASHVPRLRRYATALVGNRPDADDLVQDCVEKALANRHALRDPSKLGGWLMTILHNL 78
           D  +   +PRLRR+A +L  N  +ADDLVQ C+E+AL+  +  R    L  WL +IL+  
Sbjct: 5   DEQLRELIPRLRRFAVSLTRNPSNADDLVQMCLERALSKWNDKRPDGDLRAWLFSILYRQ 64

Query: 79  HISSQRGRRRRGAEVPVEELADDLALSAPPADRGAV-RDFVRAFAQLTDEHRTILLLTGM 137
            +   R  RR    +      DD   + P A+R  + +  ++AF QLT E R +LL   +
Sbjct: 65  FLDGHRRSRRYARMLEFFTGRDD---AHPSAERSVIAQSSLQAFDQLTTEQRALLLWVSV 121

Query: 138 EGLSYREVAEVLELPIGTVMSRLARAREKLRVLLDGGTQQVVRRI 182
           EGLSY++VA++L +P GTVMSRL+RAR+ LR L DG   +   RI
Sbjct: 122 EGLSYQQVADILGVPTGTVMSRLSRARQALRQLSDGEITRPTLRI 166