Pairwise Alignments

Query, 482 a.a., DNA repair protein RadA from Azospirillum sp. SherDot2

Subject, 454 a.a., DNA repair protein RadA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  402 bits (1033), Expect = e-116
 Identities = 218/459 (47%), Positives = 299/459 (65%), Gaps = 17/459 (3%)

Query: 1   MAKPITRYVCQACGASFPKWAGKCDACGEWNSLVE----EAAPDSAPK-----GLGAARG 51
           MAK  T YVC  CG  FP+W G+C AC EWN++ E     A+P    K     G G++  
Sbjct: 1   MAKNKTAYVCNECGQDFPRWQGQCSACHEWNTITEVRLGAASPGRGTKFAGYAGAGSSEV 60

Query: 52  RRIDFVGLHGSSEAPPRRMTGIAEFDRVCGGGLVPGSAILIGGDPGIGKSTLLLQAMARL 111
           + +D + L+    A PR ++   E DRV GGG+VPGSAILIGG PG GKSTLLLQ +  L
Sbjct: 61  KTLDQIDLN----ALPRIVSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHL 116

Query: 112 SQDHRCAYVSGEEAVDQVRLRAQRLGCATAPVDLASATSVRDIVASLDDAKGPEVIVIDS 171
           ++     YV+GEE++ QV +RA RLG  T  + + S TSV  I   +   + P+VIV+DS
Sbjct: 117 AEQMPALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQI-CEIALQESPKVIVVDS 175

Query: 172 IQTMYMDNLDSAPGTVAQVRASAQELIRVAKRRGVVLLLVGHVTKEGMIAGPRVLEHMVD 231
           IQ M+M ++ S+PG+V+QVR SA  L R AK+ G+ +++VGHVTK+G +AGP+VLEH +D
Sbjct: 176 IQVMHMSDVASSPGSVSQVRESASYLTRFAKQHGIAVIMVGHVTKDGSLAGPKVLEHCID 235

Query: 232 TVLYFEGERGHQFRILRAVKNRFGPTDEIGVFEMGDAGLGEVANPSALFLAERRGDVSGA 291
             + FEG+   ++R LR+ KNRFG  +E+GVF M + GL EVANPSA+FL+    + SG+
Sbjct: 236 CSVMFEGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGS 295

Query: 292 AVFAGMEGTRPVLVEVQALVAPSPLGTPRRAVVGWDSARLAMVLAVLEARCGVQIGANDV 351
            V    EGTRP+LVE+Q LV  S +  PRR  VG D+ RLAM+LAV+    G+Q+   DV
Sbjct: 296 LVMVVWEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDV 355

Query: 352 YLSVAGGLRITEPAADLAVAAALVSSLTGEPVPADTVVFGELGLSGEVRAVSQTDTRLKE 411
           +++V GG+++TE +ADL +  A+VSS  G+ +P+D VVFGE+GLSGE+R V     RL E
Sbjct: 356 FVNVVGGVKVTETSADLTLLLAMVSSFRGDILPSDLVVFGEVGLSGEIRPVPNGQERLVE 415

Query: 412 AAKLGFSSAIFPARRAGKKGSRGDNGLKTVELQQLGELM 450
           AAK GF  AI P     KK      G++ V + +L E +
Sbjct: 416 AAKHGFKRAIVPRANVPKK---PPVGMEVVGVSKLSEAL 451