Pairwise Alignments

Query, 270 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 245 a.a., cytochrome c oxidase assembly protein Surf1 from Caulobacter crescentus NA1000

 Score =  128 bits (322), Expect = 1e-34
 Identities = 97/253 (38%), Positives = 132/253 (52%), Gaps = 27/253 (10%)

Query: 15  RPTLGATLVTLAGLAVTI-----GLGTWQLERLHWKQELIARIDRQMAEPPAPLPARID- 68
           +P L A    L  L V       GLG WQL+R  WK +LIA++++++A PP   P  +D 
Sbjct: 2   KPRLIAKTTALVSLCVGFAVLFAGLGVWQLQRRVWKLDLIAQVEQRLAAPPVGAPGPLDW 61

Query: 69  ---DPAAWEFRPVTLAGHFLNDKDLLVIARPHQGQVGYEVLTPFERADGAGILLVNRGFV 125
               PA   +R V L+G F +D++ L  A    G  G+ VLTP  R D    +LVNRGFV
Sbjct: 62  PHLAPANDVYRRVVLSGVFDHDRETLTQAVTVLGP-GFWVLTPL-RTDQGFTVLVNRGFV 119

Query: 126 PMDRRDPATRAAARVEGETTVRGIVRVPQPPGFFQPGNGTPAPGSAWMRADPPAMAAALS 185
           P +R   + RAA +V GE  V G++R  +P G F   N  PA G  W   D  A+A +  
Sbjct: 120 PAERAAASRRAAGQVRGEIRVVGLLRFTEPGGGFLRRN-QPAAG-RWYSRDVAAIAQSRG 177

Query: 186 LSGVAPVVIEMLPGQGSINGSKLPGA-PAGTLAGIEPRVELPNNHLQYALTWYGLAVTLA 244
           L  VAP  ++        +G+  PG  P G L      V  PN+HL YALTW+ LA+  A
Sbjct: 178 LGVVAPYFVD-------ADGAPNPGGWPRGGLT----VVRFPNSHLIYALTWFALALFSA 226

Query: 245 G--IYALSQRKRA 255
           G   Y L+  +R+
Sbjct: 227 GAAAYVLADARRS 239