Pairwise Alignments

Query, 291 a.a., Cytochrome c oxidase subunit 3 from Azospirillum sp. SherDot2

Subject, 291 a.a., cytochrome c oxidase, subunit III (RefSeq) from Shewanella loihica PV-4

 Score =  193 bits (491), Expect = 3e-54
 Identities = 113/283 (39%), Positives = 158/283 (55%), Gaps = 31/283 (10%)

Query: 27  YHLLKPSPWPLIGAFSGGLLATGLVIFMHG------GGKLLMILGVLAILVTMFGWWRSV 80
           Y++   S WP+IGAF   L+A G   ++         G  ++  G+  IL  +FGW+R+V
Sbjct: 8   YYVPAQSAWPIIGAFGLFLIAYGAGSYVQQLQTEQTSGGYILTAGIAVILYMVFGWFRTV 67

Query: 81  IRESVVERAHTPVVKIGLRYGMALFIASEVMFFAAFFWAFFHA--------------ALE 126
           I ES+    ++  +    R GM+ FI SEVMFFAAFF A  +A              A+ 
Sbjct: 68  IGESM-SGLYSKQMDRSFRQGMSWFIFSEVMFFAAFFGALLYARTIAVPWLGGASNNAMT 126

Query: 127 PKVSPLNPDAIWP---PPNVHVIDAFD---MPLMMTLTLLLSGVTVTWAHHAIIEGHNRT 180
            +V   N  A+WP    P+    +A     +PL  T+ LL S VT+ +AH ++ +     
Sbjct: 127 HEVLWPNFQAVWPLVTTPDGTKTEAMGWTGLPLYNTIILLTSSVTLHFAHVSLEKSKRTA 186

Query: 181 AAKALGLTVLLGVLFSFFQVYEYVHA----SFKFTDGIFPSTFYMATGFHGFHVLVGTIF 236
               LG+T+LLG+ F F Q  EY HA        + G++ +TF++ TGFHG HV +GTIF
Sbjct: 187 LTLWLGITILLGLAFLFLQAKEYAHAYQEMGLTLSSGVYGNTFFLLTGFHGMHVTLGTIF 246

Query: 237 LAVCWFRTNKGHFTPESHFGFEAAAWYWHFVDVVWLFLFVSVY 279
           L V + R  +GHFTP+ HF F+A +WYWHFVDVVWL LFV VY
Sbjct: 247 LFVLFLRVLRGHFTPDKHFAFQAGSWYWHFVDVVWLCLFVFVY 289