Pairwise Alignments

Query, 421 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (295), Expect = 3e-31
 Identities = 87/345 (25%), Positives = 156/345 (45%), Gaps = 17/345 (4%)

Query: 80  VAGQAAERPVELTALEVTAVAPRALTETVRLSGSVSPMEQSAVKAEVAARLAEVAVREGQ 139
           +A   A RP     + V    P      +   G + P +   +  E A  + ++    G 
Sbjct: 30  IAEYLANRPEPEFPVTVVTANPVDWVPVIEAIGFIEPNQGVTLTTETAGVIDQITFESGT 89

Query: 140 AVRRGEMLARFDTVELTARLNEKQANLEGARAQLVLAEKTLTKNRTLNRSNIVSDTSLDQ 199
            V + + L   D+         ++ANL+   A+L  A+    + + L     +S  S D+
Sbjct: 90  QVAKDQPLVLLDSAV-------ERANLKSTEARLPAAKAKYERYKGLFAKGSISKESYDE 142

Query: 200 AESSFGFQRAQVDALAAQVELARKALRDAVVLSPIDGMVATRSVNPGENLAVNAAMFTVV 259
           AE+S+    A +++L A +  AR+ ++     +P  G++  R+V  G+ L     +  + 
Sbjct: 143 AEASYYALSADIESLKATI--ARREIK-----APFAGVIGIRNVFLGQYLQPGTDIVRLE 195

Query: 260 DLSRVEVEATVPAEQVARLAVGQTASLRVEGFGEREFAGSVARINPMARAGSRAIPVYVT 319
           D S + +  TVP   ++R+++ Q   + V+ + +  F GS++ I P     S  I V   
Sbjct: 196 DTSVMRLRFTVPQRDISRISLDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQVQAD 255

Query: 320 IDNRDGALRGGMFASGEVLVAQAAGAIAVPPVAVRHDGQGDFVLAIADGH---TVRRPVT 376
           I N DG LR GMFA   +++ +    + +P  A+ +   GD V  +++ +    V++ V 
Sbjct: 256 IPNSDGKLRSGMFARANIILPKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVV 315

Query: 377 RVALWARGDLVQVEGLAPGDRVVTGNLPGLTAGRSVSIAGSGAGT 421
           +V   +      +EG+ PGD VVT     L+ G  V I  S A T
Sbjct: 316 KVGERSESIAHILEGVKPGDVVVTTGQVRLSNGAKVRIVESDATT 360