Pairwise Alignments

Query, 452 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1430 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  103 bits (256), Expect = 5e-26
 Identities = 99/290 (34%), Positives = 135/290 (46%), Gaps = 37/290 (12%)

Query: 173  PLLPRQQDRLLAV---QAAGAALRTTVAALRSVGPGAEAEESLTLAALAADAKAMSIEGG 229
            P LPR   R LAV   + A  +L  T+AAL +    A + E+   A LAAD         
Sbjct: 925  PCLPRNL-RALAVDDSEDARESLAHTLAALGTRVDTAASGEAALDAVLAADR-------- 975

Query: 230  ADEEFIGDAAGLRGLLTLLAAEGGA-------SLSLSLRP-------AGDAAELTLRRRG 275
                 +GD   L  L  L+    G        +L L+++P       A D     L   G
Sbjct: 976  -----LGDPYQLVLLDWLMPPPDGLETGRCIRTLPLNVQPQQLLVSAAKDIPATALSEAG 1030

Query: 276  AARLRPLVLAAVQPLVRRLGGHLPTDGPDGAAGEWLTVRIPVRAVLRPAALSVLLVEDNP 335
             A      +     LV   G    T     + G+ +      R++ R     +LL EDNP
Sbjct: 1031 FAAFIAKPVTPASVLVALEGAFGDTPPLSRSPGDEME-----RSLARYRNQRILLAEDNP 1085

Query: 336  IGRLVAAGFFKALGHTVTTAEDGAQGLAAATDGRFDLIVMDVQMPVMDGHEAARAIRALP 395
            + + VA    + +G  V  AE+G + L  A    + LI+MD+QMPVMDG EA+R IRALP
Sbjct: 1086 LNQEVALELLRHVGLAVDLAENGKEALELARGKAYALILMDIQMPVMDGLEASRQIRALP 1145

Query: 396  GEAGRVPIVALTAGTDAEDDAQCHAAGMDDCLHKPLTMDRLRTVLERLFP 445
            G AG  PI+A+TA   +ED   C AAGM+D + KP+  D+L   L R  P
Sbjct: 1146 GYAG-TPILAMTANAFSEDRDLCIAAGMNDHVAKPVDPDQLYGTLLRWLP 1194



 Score = 43.9 bits (102), Expect = 3e-08
 Identities = 52/178 (29%), Positives = 70/178 (39%), Gaps = 18/178 (10%)

Query: 282  LVLAAVQPLVRRLGGHLPTDGPDGAAGEWLTVRIPVRAVLR----------PAALSVLLV 331
            L LA  + L   +GG +  D   G  G    +  P  +V            P  L  L V
Sbjct: 878  LGLAISRRLAEMMGGRVGVDSESGK-GSTFWIEAPFGSVAAHDHLELPPCLPRNLRALAV 936

Query: 332  EDNPIGRLVAAGFFKALGHTVTTAEDGAQGLAA--ATD---GRFDLIVMDVQMPVMDGHE 386
            +D+   R   A    ALG  V TA  G   L A  A D     + L+++D  MP  DG E
Sbjct: 937  DDSEDARESLAHTLAALGTRVDTAASGEAALDAVLAADRLGDPYQLVLLDWLMPPPDGLE 996

Query: 387  AARAIRALPGEAGRVPIVALTAGTDAEDDAQCHAAGMDDCLHKPLTMDRLRTVLERLF 444
              R IR LP       ++ ++A  D    A    AG    + KP+T   +   LE  F
Sbjct: 997  TGRCIRTLPLNVQPQQLL-VSAAKDIPATA-LSEAGFAAFIAKPVTPASVLVALEGAF 1052