Pairwise Alignments
Query, 827 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 955 a.a., PAS domain S-box from Dechlorosoma suillum PS
Score = 269 bits (687), Expect = 6e-76
Identities = 212/764 (27%), Positives = 349/764 (45%), Gaps = 71/764 (9%)
Query: 1 MRLNEPITDREIVMEDGVLLVSRTDTGGRITFVNKAFVDISGYAESELIGAPHNLIRHPH 60
MR N P+T+ E+ + D L+VS+TD G+IT++N+ F++ISG+ E+ELIG PHN++RHP
Sbjct: 1 MRTNLPVTNVEVPLRDDTLIVSKTDLKGQITYINRDFIEISGFTEAELIGEPHNIVRHPD 60
Query: 61 MPKEAFADLWATIKDGRPWEGLVKNRTRDGDFYWVRANVTPVIENGAVTGFISIRTKPSR 120
MP EA+AD+W +K GRPW GLVKNR ++GD YWV AN TP+ EN V G++S+R KPSR
Sbjct: 61 MPSEAYADMWTHLKAGRPWTGLVKNRCKNGDHYWVEANATPIRENDQVVGYMSVRRKPSR 120
Query: 121 DQVAAAERLYSDIREGRARHLTVRDGQAVGRGAGAGFRRWMTTVTGRLTLIFAFMILSML 180
DQV AAE Y RE RA L + G+ V G G R ++ RL L F +L +
Sbjct: 121 DQVEAAENAYRLFRENRAGSLRILCGKVVRGGPSLGDRFASLSLATRLGLGFGLAVLFAV 180
Query: 181 AVGGVTLRGMSDSNASLKMVYEHRTVPAVQIGEILDHMRDN-VQTLQRLIIDTRDGTDPK 239
VG + L ++++N SL+ + R P + I + DN Q L L + GT
Sbjct: 181 VVGVLGLYALNNTNESLERAFTDRLQPVQGLARIGKLVADNRAQVL--LGLQHEPGTSNA 238
Query: 240 A-----MAQREDRIAGNAATIDRLWADYLTTFMTPEETILADRFARQRAAFLNEGLKPAM 294
A + D IA N + +W Y + + E LA+ + R +++EG+ PA
Sbjct: 239 ASHEHPVTAHTDIIAKNREELTAIWQRYQQSIRSDEHKALAEAYFIARKRYVDEGINPAR 298
Query: 295 ELARQGDSLRLEVLVRDRIDPLFQAAFQTNKDLLQLQLTVAKGDYEGALEDFRWHLVFAV 354
+ +G + ++ ++I+PL+ L Q A+ D + A + V
Sbjct: 299 DALNEGHFAEAQRILSEKINPLYDEVSAKTDALYQYHADQARKDAQAADDLKATTTGTIV 358
Query: 355 AAGLAVLLGAVFCGLLLLRTVCRPLAAFSVDFDAIARNDQTHTIDLPAAAEFHPIAGQLR 414
A + V++ F L + R LA F A+++ H +D+ E + ++
Sbjct: 359 GAIVLVIVLLTFIAWRLSGGILRSLADAQAAFGAVSQGRYNHQVDITRNDEMGRLLQGIQ 418
Query: 415 GLKARLCYAVQERVERARH-----------------ADEER-----RRALETMASTVERE 452
++ +L + V E A AD++ +A+E M VE +
Sbjct: 419 AMQIKLGFDVAEAQRIANENLRIKIGLDNVATNVMVADDQHNIIYMNKAVEDMFRRVEDD 478
Query: 453 AGRAVEEVAQRT--GAMADD-----------AEGMSGS--------AERVSVNAQTVASA 491
R + + T G+ D +SGS S+ V +
Sbjct: 479 IRRDLPDFRAATLLGSNIDVFHKNPAHQRGLLSRLSGSHRATVHLGGRTFSLTVTPVVNE 538
Query: 492 AGQALANAQTVAAASEELA--ASIREISSQVAHSSAVTRRAVESGHHTQATIRSLSETVA 549
G L +A + E+A A + +I + A+ TRR V G R LSE +
Sbjct: 539 RGIRLGSAVEWLDRTAEVAVEAEVADIVNGAANGD-FTRRLVLEG--KDGFFRQLSEGIN 595
Query: 550 KVGEVVNL-IQSIAGQTNLLA---LNATIEAARAGEAGKGFAVVAQEVKNLANQTASSTE 605
++ E + +A N ++ L + IEA AG G ++KN AN T +
Sbjct: 596 RLLETSQKGLDDVARMLNAMSQGDLTSRIEADYAGTFG--------QLKNDANSTVEQLK 647
Query: 606 EITRQITAIQAVTDEAVQAVEEIGRTIAEIDHIAGSIAAAMEQQSAATQEISRNVVETST 665
EI + I+ T+ A +EI ++ A+++E+ +++ ++++ V + +
Sbjct: 648 EI---VERIKGATEAINTAAQEIASGNTDLSSRTEEQASSLEETASSMEQLTSTVKQNAD 704
Query: 666 AAQEVSYRIAAVSEEADRTGEQATHVKNGSGDVARSIESLRQVL 709
A+ + + + A + GE V G + S + ++
Sbjct: 705 NARTANELASGAQQVAVKGGEVVEQVVQTMGAIHHSSSKIADII 748
Score = 114 bits (285), Expect = 3e-29
Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 44/331 (13%)
Query: 371 LLRTVCRPLAAFSVDFDAIARNDQTHTIDLPAAAEFHPIAGQLRGLKARLCYAVQERVER 430
LL T + L + +A+++ D T I+ A F GQL+ ++E VER
Sbjct: 597 LLETSQKGLDDVARMLNAMSQGDLTSRIEADYAGTF----GQLKNDANSTVEQLKEIVER 652
Query: 431 ARHADEERRRALETMASTVEREAGRAVEEVAQRTGAMADDAEGMSGSAERVSVNAQTVAS 490
+ A E A + +AS + EE A A E ++ + ++ + NA+T
Sbjct: 653 IKGATEAINTAAQEIASG-NTDLSSRTEEQASSLEETASSMEQLTSTVKQNADNART--- 708
Query: 491 AAGQALANAQTVAAASEELAASIREISSQVAHSSAVTRRAVESGHHTQATIRSLSETVAK 550
A + + AQ VA E+ + + + HSS+ K
Sbjct: 709 -ANELASGAQQVAVKGGEVVEQVVQTMGAIHHSSS------------------------K 743
Query: 551 VGEVVNLIQSIAGQTNLLALNATIEAARAGEAGKGFAVVAQEVKNLANQTASSTEEITRQ 610
+ +++ +I IA QTN+LALNA +EAARAGE G+GFAVVA EV+NLA ++A++ +EI
Sbjct: 744 IADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRNLAQRSAAAAKEIKAL 803
Query: 611 IT-AIQAV------TDEAVQAVEEIGRTIAEIDHIAGSIAAAMEQQSAATQEISRNVVET 663
I+ +++ V D A + +EE+ +I + I IA A +QSA +++ V
Sbjct: 804 ISDSVEKVENGSRLVDSAGRTMEEVVTSIKRVAKIMADIAEASREQSAGIEQVGLAV--- 860
Query: 664 STAAQEVSYRIAAVSEEADRTGEQATHVKNG 694
+ EV+ + AA+ EEA E +G
Sbjct: 861 -SQMDEVTQQNAALVEEAAAAAESLEEQAHG 890