Pairwise Alignments

Query, 290 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 5e-18
 Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 15/227 (6%)

Query: 63  YAPYTGDDLPGGGLVTDLVRRAFAVGGRRYDVRFMPWKRGYDGVVAGRFLATFPYIRTPE 122
           + P+  ++    GL  D+V  AFA  G   +   MPW R  + V  G+         T E
Sbjct: 30  WPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE 89

Query: 123 REREVLFSDPVMEVRQFVYLSNRSGMEFRGRAGGG-DSGGLEDFQGRTICQPVGYALPAG 181
           R   + +SD         YL+N+  ++F  +AG   +  GL    G+ +    GY    G
Sbjct: 90  RTAYLTYSDN--------YLTNQ--VKFIKKAGDNFEFAGLASLNGKKVGIVRGYGY--G 137

Query: 182 LEAMVDQGRLTRQTPSDLGACVRMMATGRADVLVIDEFSGAAAIQRSGL-ADDIRVAERP 240
            E M D     R   +DL   ++ +  GR D+ V DE    + I  +G+   D     + 
Sbjct: 138 DEFMNDPS-FFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLADFAFTNQA 196

Query: 241 FAVVTLHLVVGRGTPGAETTVADFNDGLKALKRQGVYHQLLLSHTLR 287
            +   LH+  G+  P +E  VA FN GL  +K  G + +LL  + ++
Sbjct: 197 ISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADYGIK 243