Pairwise Alignments

Query, 390 a.a., Carbamoyl-phosphate synthase small chain from Azospirillum sp. SherDot2

Subject, 386 a.a., carbamoyl-phosphate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  389 bits (1000), Expect = e-113
 Identities = 206/375 (54%), Positives = 256/375 (68%), Gaps = 8/375 (2%)

Query: 14  TGVLVLADGTVFRGRGIGATGDSVGEVCFNTSMTGYQEILTDPSYAGQIITFTFPHIGNT 73
           + +LVL DGTVF G  IGA G SVGEV FNTSMTGYQEILTDPSY+ QI+T T+PHIGNT
Sbjct: 8   SALLVLEDGTVFTGTAIGADGLSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 67

Query: 74  GANLEDIETITPAARGLILRADITDPSNWRATRHLDDWLKSYGLVGLTGIDTRRLTRRIR 133
           G N ED+E+    A GLI+R      S++R  ++L D+LK+  +VG+  IDTR+LTR +R
Sbjct: 68  GTNNEDVESNGVHACGLIIRDLPLIASSFRNQQNLSDYLKANNVVGIADIDTRKLTRILR 127

Query: 134 DLGAPNGVVAHAPDGKFDIEALVAKAKGWPGLEGMDLAKDVSCRQTYDWTEAGWTIGGGY 193
           + GA  G +    D   D    +A AK +PGL+GMDLAK+V+  + Y W +  W + GG 
Sbjct: 128 EKGAQAGCIMAGAD--LDEVKALAAAKAFPGLKGMDLAKEVTTDKAYPWRKGSWRLVGGL 185

Query: 194 ATLDKP----QYHVVAIDYGAKRNILRCLAAAGCKVTVVPSTATVEDVMRHQPDGVFLSN 249
              D P    +Y VVA DYG K+NILR L   GC VTVVP+     +V+   PDGVFLSN
Sbjct: 186 PA-DTPAEALKYKVVAYDYGVKQNILRMLVDRGCDVTVVPAKTPASEVLAMNPDGVFLSN 244

Query: 250 GPGDPAATGEYAVPTIKGLLDTGVPMFGICLGHQMLSLALGAKTTKMQQGHRGANHPVKD 309
           GPGDP    +YA+  I+ +L T  P+FGICLGHQ+L+LA GAKT KM+ GH GANHPV +
Sbjct: 245 GPGDPEPC-DYAIEAIQQILKTDTPIFGICLGHQLLALASGAKTLKMKFGHHGANHPVSN 303

Query: 310 LASGRVEITSQNHGFVVMPETLPADAEVTHVSLFDGTNEGIRLKGKPVFSVQYHPEASPG 369
           +  G V ITSQNHGF     TLPA+ +VTH SLFDG+ +GI L  KP FS Q HPEASPG
Sbjct: 304 IEKGNVMITSQNHGFAADEATLPANIKVTHKSLFDGSLQGIHLTDKPAFSFQGHPEASPG 363

Query: 370 PQDSHYLFDRFVQLI 384
           P D+  LFD F++LI
Sbjct: 364 PNDAAPLFDHFIELI 378