Pairwise Alignments

Query, 562 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 556 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  350 bits (898), Expect = e-101
 Identities = 208/554 (37%), Positives = 318/554 (57%), Gaps = 13/554 (2%)

Query: 11  KLWALVALAGAVSIAIAAAALWLDQRN---MLEERKETLRSVVHTAHGLATGYEAEVKAG 67
           K+  +VA+ G   +A+     WL +     +L+ER    R +   A G+AT  +AEV AG
Sbjct: 10  KISVIVAIMG---LALCVTVGWLLKSQYDALLDERVAQTRGLTEAAAGVATKLQAEVSAG 66

Query: 68  RLTREQAFERFKANLNTMFYNGKDYIFVQNLNYQTVIHPVRPDVIGKDQRDNKDSNGVFF 127
           +++R+QA   +K  LN M Y G  Y+F   ++   ++ P RPD++GK   D     GVF 
Sbjct: 67  KISRDQAIGTWKTALNGMIYGGNGYLFAYAMDGINLVLPPRPDLVGKPAADR----GVFL 122

Query: 128 VRALVDTART-KGDGFVEYMYPKPNTEVPLPKLSYVKMFEPWQLLIGTGVYIDDLDARFT 186
             AL   AR   G G V+Y++P+     P+PK+S+      W LL+GTGVY+DD+ A F 
Sbjct: 123 --ALQAAARRGPGGGRVDYVWPRVKDGPPIPKVSWAMEVPSWDLLVGTGVYVDDVQAIFW 180

Query: 187 SSLWTMAVVVGGLALPVVALIALVGNSISRRIRRLSDSMRSLADGNLSTVIPETDSGDEL 246
           + L    ++ G L+   + L++L+   +S  +  ++  M  ++ G +   +P  D  DE 
Sbjct: 181 AKLREAMLIGGLLSAVALLLVSLISRDLSAVLGDIAKRMALISGGKIDIAVPHQDRRDEA 240

Query: 247 GDMGRAVQVFRVNAEDSRRLEAEQAEANRQAEAEKRQSMDRLAARFEGTVGGMIRSVSTT 306
           G M R+++VFR    ++ +L  +Q      AEA ++ ++  LA RFE +V  + ++V+  
Sbjct: 241 GAMARSLEVFRGTVAETEKLRGDQERLKASAEAARKANLVELAKRFEDSVNSVAQAVAKG 300

Query: 307 TEALGQKVRAMSQAAEQTSQLAGIVASASDDTAANVQTVAAASEELTGSIVEIGRQVSEA 366
              + +  R M   A  T + AG  ++ S+ T A  QTVA+ASE+L+ SI EI  Q  +A
Sbjct: 301 ARTMDENARTMFSLANVTREKAGQSSAMSERTNATFQTVASASEQLSASIREIANQTDKA 360

Query: 367 SRVAGEAVGMAQEATGRISSLAEAVERIGTVVGLINSIAGQTNLLALNATIEAARAGEAG 426
              + +AV  A ++  R++ L +  E+IG V+ LI +IA QTNLLALNATIEAARAG+AG
Sbjct: 361 RVTSQQAVETADQSADRMAGLVDDAEKIGAVITLIETIASQTNLLALNATIEAARAGDAG 420

Query: 427 KGFAVVASEVKALANQTAKATDEIGGQMSGIQTVTGQAVTEIQKVAAVIERLSGIATAIS 486
           KGFAVVA EVK L+ QT KAT++I GQ+  ++     A ++I  ++ VI  ++  A AIS
Sbjct: 421 KGFAVVAHEVKNLSTQTRKATEDIRGQIERVRASVSAAASDIATISDVIHDIAKAAGAIS 480

Query: 487 AAVEQQNAATAEITRSVQQAAAGTGEVSSSISGVTAASDESGRTARELVDALGKLTSEAA 546
            AVE+Q AAT EI+RSVQ+  + + + S  I  +  A+ E+  TA  L D  G+L   AA
Sbjct: 481 IAVEEQGAATTEISRSVQEVLSTSADASRDIHTLAEAARETESTAGALRDTAGELGQAAA 540

Query: 547 GLNAQVGDFLATVR 560
            L  +V  FL  +R
Sbjct: 541 SLQEKVDGFLGDLR 554