Pairwise Alignments

Query, 442 a.a., 47 kDa outer membrane protein from Azospirillum sp. SherDot2

Subject, 440 a.a., long-chain fatty acid transport protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  156 bits (394), Expect = 1e-42
 Identities = 127/432 (29%), Positives = 195/432 (45%), Gaps = 52/432 (12%)

Query: 17  ITVTAATAST-AFAAGFALKEQSVSGQGTAYAGVTAGGNGDASSMFYNPATMGLVTGIEA 75
           +TV  A AS+  FA+GF L  QS +G G A+AG     + +A+ +  NPA M L    +A
Sbjct: 9   LTVAIALASSQTFASGFQLNSQSATGMGRAFAGDAVIAD-NATVLSRNPAAMALFDK-DA 66

Query: 76  VQTATGVIVKSKVDSASANRARRLGGTSIGGNASPGDIAQDALVPAGYFVYSIDDDLKVG 135
           +           VD    N     G   +G   S  D     ++P  ++++ IDD   VG
Sbjct: 67  ISFGL-TYADITVDVKDVNFNLPNGAVDLG---SIDDAGSSKVIPNIFYIHPIDDKFAVG 122

Query: 136 ISANGPWGLVTDYGDSWIGRYHGI--------RSDLRTYNFAPSVSYRINPMITLGGGVQ 187
            +A   +G  TD          G          +++ T NF  SVSYRIN + ++G GV 
Sbjct: 123 FAAFSNFGTGTDASSLSKNLPKGSPAPYDLLGETEVTTVNFNASVSYRINDIFSIGAGVD 182

Query: 188 IQYAKAKLSQSSDFGASRLGRPGSLDVKSDVTGDDWGWGFTLGALIEPVKGTRVGLAYRS 247
             Y           G  RL R  S     DV  D W +G  LGA +E  K  R G++YR 
Sbjct: 183 AIY-----------GEGRLTRNASTTPLVDVDADGWAFGGILGATVELDKDNRFGISYRF 231

Query: 248 AVKHTLTGSISFTGLPAPLAGALPAQSA------SADLTTPDIASIGLYHEVNDRWAVMA 301
           +    + G I+        A  L +++A      S D+   DI  +  +H++  ++A+  
Sbjct: 232 SPTVNVEGDINTISTKDLSAAGLGSKTALATNFDSLDVPLADIFQVAGFHQITPKFALHY 291

Query: 302 DVQWTNWSRFRELRVN--------------IANPALNSVTEEH-WKDTWYYALGTSYKVT 346
             Q+T WS+F ++                 I  PA +   +E+ WKD+W ++LG +Y + 
Sbjct: 292 TAQYTQWSKFDQITAKDGVATIIPGQAGAGIKLPAGDIALKEYQWKDSWLFSLGGTYTIN 351

Query: 347 DKLTLRAGVAFDQGSVDVEYRTPRIPEQNRYWLSAGAGYQVTDNLRVDAAYSHVFIPKTS 406
           ++ T+RAG   DQG VD E  +   P+ +R W +AG  Y +     VD  +   FI    
Sbjct: 352 EQFTVRAGYMHDQGVVD-EISSISFPDSDRNWYTAGMSYHINPQNTVD--FGIAFIKGEE 408

Query: 407 VALTDD--LTGP 416
           V L ++  +TGP
Sbjct: 409 VHLIENSAITGP 420