Pairwise Alignments

Query, 259 a.a., Ribosomal RNA small subunit methyltransferase E from Azospirillum sp. SherDot2

Subject, 249 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Ralstonia solanacearum IBSBF1503

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 23/252 (9%)

Query: 8   RLYVDSPLAEGQSVGLDHERAHFLRHVLRLDRGDSVAVFNGRDGEWRAVIDGFGKGWCSL 67
           R Y+DSPLA   +V L    A  + HVLRL  GD V +F+G   E+RA +D   +   + 
Sbjct: 5   RFYIDSPLAPHTTVTLPESVARHI-HVLRLAVGDDVQLFDGSGLEFRARLDAINRRDATA 63

Query: 68  TVAEQRREQDTTPDLWLVFA-PLKKG-----RIDFVAEKATEMGVSRLWPVFTRR----- 116
           ++A+      T PD    +A  L +G     ++D++ EKA E+GV  + P+ T R     
Sbjct: 64  SLADA-----TQPDTEARYAITLAQGIAGGDKMDWLIEKAVELGVHAIAPLQTERGVVRL 118

Query: 117 -TDPNRVNLDRLRANAVEAAEQCERLSVPEMGEAVPLDRALAGWPADRRLYLCAEAGAAR 175
             +     +   +A    A EQC R  VP +     L   L    A  R  +      ++
Sbjct: 119 SGERAAKRVQHWQALVQAACEQCGRARVPAVSPVTTLRDWLTAAKASGRARIMLSPRGSQ 178

Query: 176 PV----AEVLRDAPPGPAALLVGPEGGFDQSELDELAKLPFVVPVGLGPRILRADTAVVA 231
            +    A+           LL+GPEGG    E + LA+    +P+ LG RILR ++A + 
Sbjct: 179 SLTQWAAQSRERIDSTGIELLIGPEGGLSPDE-ESLAEAAGYLPLTLGRRILRTESAALV 237

Query: 232 ALACWQSLAGDW 243
           A++   ++ G++
Sbjct: 238 AVSALHAVLGEF 249