Pairwise Alignments

Query, 422 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 563 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  224 bits (572), Expect = 4e-63
 Identities = 130/270 (48%), Positives = 185/270 (68%), Gaps = 7/270 (2%)

Query: 147 VTQRFEGQIQSVCSEVADTAHRLEVSARTMETDATQATGKASSVAASAAQTGSNVGSVAA 206
           +T  F+G+I ++ + V      L  +A+TM++++ +A+ +A++VAA++ Q  +NV +VA+
Sbjct: 289 LTTNFDGKISNLLTLVEGALTELNATAQTMQSNSERASQQATTVAAASEQASTNVQTVAS 348

Query: 207 ATEELSASIADISRQIGDVARVAETAVGEAERSNALVGTLSGAARTVGDVVTLINDIASQ 266
           A EELS +I +I RQ+   +  ++ A  EAER+N +V +L+ ++  +GDV+ LINDIASQ
Sbjct: 349 AAEELSNAIVEIGRQVERSSATSKAASEEAERTNKIVLSLADSSLKIGDVIGLINDIASQ 408

Query: 267 TNLLALNATIEAARAGEAGKGFAVVAQEVKRLADQTAKATGDIAAQISAIQSSTDEAVTS 326
           TNLLALNATIEAARAG+AGKGFAVVA EVK LA+QTAKAT  I AQI ++QS+T EAVT+
Sbjct: 409 TNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTAKATEGITAQIGSVQSATQEAVTA 468

Query: 327 IVGIGHTIQSINRIAAGISAGIEQQGSAVREIVVNMEQAAAGTRAVSDDIRDVTDAAGRT 386
           I GI   I  IN I+ GI+A +E+Q +A  EI  N +QAA GT+ +S       + AG T
Sbjct: 469 INGISTRIGEINEISTGIAAAVEEQSAATGEIARNAQQAAQGTQEIS------ANNAGMT 522

Query: 387 SGTAHEVFAASGRMAAEADRLTREVQHFLD 416
             T+ E  AASGR+ + A  L +E     D
Sbjct: 523 Q-TSRETGAASGRVLSAAQALEKETASLKD 551



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 23/179 (12%)

Query: 153 GQIQSVCSEVADTAHRLEVSARTMETDATQATGKASSVAASAAQTGSN------------ 200
           G +  + +++A   + L ++A T+E       GK  +V A   ++ +N            
Sbjct: 396 GDVIGLINDIASQTNLLALNA-TIEAARAGDAGKGFAVVAGEVKSLANQTAKATEGITAQ 454

Query: 201 VGSVAAATEELSASIADISRQIGDVARVAETAVGEAERSNALVGTLSGAARTVGDVVTLI 260
           +GSV +AT+E   +I  IS +IG++  ++       E  +A  G ++  A+         
Sbjct: 455 IGSVQSATQEAVTAINGISTRIGEINEISTGIAAAVEEQSAATGEIARNAQ--------- 505

Query: 261 NDIASQTNLLALNATIEAARAGEAGKGFAVVAQEVKRLADQTAKATGDIAAQISAIQSS 319
              A  T  ++ N       + E G     V    + L  +TA     +A+ +  ++S+
Sbjct: 506 -QAAQGTQEISANNAGMTQTSRETGAASGRVLSAAQALEKETASLKDVVASFLDGVRSA 563