Pairwise Alignments

Query, 422 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 672 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  241 bits (614), Expect = 6e-68
 Identities = 156/407 (38%), Positives = 230/407 (56%), Gaps = 32/407 (7%)

Query: 13  ADLLQMGGLALRAGLAVAGLAALGGALLYLHRAGAAVDRLTRVNRA---VAAGDFEARVI 69
           AD + +    +   +A+  + AL G++++     A    LTR+N A   +A G+    + 
Sbjct: 290 ADAVLVQANRVSFAVAIVVMLALIGSVIFTFVGVARP--LTRLNGALSRIAEGELNTEIP 347

Query: 70  GIREGGALGELMHATNDAIDRTDAFVREATASMHAVSEHKYFRRIVLRGMQGGFLHASRT 129
           G   G  +G++           +   RE   +                         +R 
Sbjct: 348 GATRGDEVGDIAKTVVVISKNAEQKAREEAEAQ------------------------ARQ 383

Query: 130 INAATESISQKVAGFAGVTQRFEGQIQSVCSEVADTAHRLEVSARTMETDATQATGKASS 189
              A +   Q++   A     FE  +  +   V+  +  LE SA T+ + A +A    + 
Sbjct: 384 EQIAAQRRKQEMIQLA---DGFESAVGEIVDTVSSASTELEASATTLTSTAERAQELTTM 440

Query: 190 VAASAAQTGSNVGSVAAATEELSASIADISRQIGDVARVAETAVGEAERSNALVGTLSGA 249
           VAA++ +  +NV SVA+ATEELS+S+ +ISRQ+ D AR+A  AV +A  +N  V  LS A
Sbjct: 441 VAAASEEASTNVQSVASATEELSSSVNEISRQVQDSARIANDAVSQARLTNDRVSELSKA 500

Query: 250 ARTVGDVVTLINDIASQTNLLALNATIEAARAGEAGKGFAVVAQEVKRLADQTAKATGDI 309
           A  +GDVV LIN IA QTNLLALNATIEAARAGEAG+GFAVVA EVK LA+QTAKATGDI
Sbjct: 501 AARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGDI 560

Query: 310 AAQISAIQSSTDEAVTSIVGIGHTIQSINRIAAGISAGIEQQGSAVREIVVNMEQAAAGT 369
           + QIS+IQ +T E+V +I  I  TI+ ++ I++ I++ +E+QG+A  EI  N++QAA GT
Sbjct: 561 SQQISSIQGATSESVNAIRDISATIEKLSEISSTIASAVEEQGAATLEISRNVQQAAQGT 620

Query: 370 RAVSDDIRDVTDAAGRTSGTAHEVFAASGRMAAEADRLTREVQHFLD 416
             VS +I DV   A  T   + +V +A+  ++A+++RL  EV  FL+
Sbjct: 621 HQVSSNITDVQRGASETGSASSQVLSAAQSLSADSNRLKTEVTKFLN 667



 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 85/374 (22%), Positives = 146/374 (39%), Gaps = 42/374 (11%)

Query: 57  RAVAAGDFEARVIGIREGGALGELMHATNDAIDRTDAF---VREATASMHAVSEHKYFRR 113
           R   +G++ + +  IR   A      AT   +   D+    +R AT    A  E    + 
Sbjct: 143 RNALSGEWRSALDAIRTSPATAANRLATEAILYEADSHFNAIRAATWRFSATGEDSQKKA 202

Query: 114 IVLRGMQ-GGFLHASRTINAATESISQKVAGFAGVTQRFEG----QIQSVCSEVADTAHR 168
           I  R  +    L   R++    +S+S ++   A   + F       ++S   ++ + A  
Sbjct: 203 IDTRTNELNDTLSRLRSV-VTDKSLSDEIDQLATAGKTFNDLTAVALKSEAGKLENAAAA 261

Query: 169 LEVSARTMETDATQATGKASSVAASAAQTGSNVGSVAAATEELSASIADISRQIGDVARV 228
           L ++ R+ E    +A    SS    AA+  ++   V A     + +I  +   IG V   
Sbjct: 262 LGIANRSAEL--MRAAVNESSKNYRAAKDDADAVLVQANRVSFAVAIVVMLALIGSVIF- 318

Query: 229 AETAVGEAERSNALVGTLSGAAR----------TVGDVVTLINDIASQTNLLALNATIEA 278
             T VG A     L G LS  A           T GD V    DIA    +++ NA  +A
Sbjct: 319 --TFVGVARPLTRLNGALSRIAEGELNTEIPGATRGDEV---GDIAKTVVVISKNAEQKA 373

Query: 279 ARAGEAGKGFAVVA-----QEVKRLADQTAKATGDIAAQISAIQSSTDEAVTSIVGIGHT 333
               EA      +A     QE+ +LAD    A G+I   +S+  +  + + T++      
Sbjct: 374 REEAEAQARQEQIAAQRRKQEMIQLADGFESAVGEIVDTVSSASTELEASATTLTSTAER 433

Query: 334 IQSINRIAAG----ISAGIEQQGSAVREIVVNMEQAAAGTRAVSDDIRDVTDAAGR---T 386
            Q +  + A      S  ++   SA  E+  ++ +    +R V D  R   DA  +   T
Sbjct: 434 AQELTTMVAAASEEASTNVQSVASATEELSSSVNEI---SRQVQDSARIANDAVSQARLT 490

Query: 387 SGTAHEVFAASGRM 400
           +    E+  A+ R+
Sbjct: 491 NDRVSELSKAAARI 504