Pairwise Alignments

Query, 296 a.a., HTH-type transcriptional activator AmpR from Azospirillum sp. SherDot2

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (426), Expect = 1e-46
 Identities = 100/297 (33%), Positives = 158/297 (53%), Gaps = 6/297 (2%)

Query: 1   MVRPYLPLNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKLLEERLGASLFHRLPRGL 60
           M R   PLN+L+ FEA+ARHLSFTRAA EL VTQAAVSHQ+K LEE LG  LF R  R L
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  ALTDEGRALLPTLEEAFDRIGGLLDQFEGGRFREVLTVGAVGTFAVGWLLPRLTRFREAH 120
            LT+EG++    +++ F  +    D+      +  LT+    +FA+ WL+PRL  F +  
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 121 PFVDLRLSTNNNRVDIAAEGLDYAIRFGDGAWHGTEAVPLFDAPLSVLCAPEIA---RRL 177
           P +D+R+   +       + +D AI +G G+W G  A  L+   L  LC+P +    + +
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180

Query: 178 REPADVGRETLLRSYRSDEWPGWFAAAGVEPAAMPAVKGPVFDSSSLMVEAAIQGAGVAL 237
            + +D+   TLL      +W  +    G++   +    GP+F  S+++++AA  G GVAL
Sbjct: 181 EKLSDLAYHTLLHDTSRKDWKQFAKENGLDNVNVN--HGPIFSHSTMVLQAAAHGQGVAL 238

Query: 238 APVAMFRRPLAVGLIEQPF-AVTVCKGAYWLTSLKSRPETPTMRAFRDWLFGMVAEE 293
               + +  +  G +  PF  V +   A+++   + + +   +  FRDW+      E
Sbjct: 239 GNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARSE 295