Pairwise Alignments

Query, 638 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 610 a.a., PAS domain-containing sensor histidine kinase from Rhodopseudomonas palustris CGA009

 Score =  177 bits (449), Expect = 1e-48
 Identities = 127/386 (32%), Positives = 189/386 (48%), Gaps = 20/386 (5%)

Query: 253 LRLSEARNEAVLDTAADAILTVDEAGVLLSFNRAAEAMFGVAAGDLLWRPLDRLIPLADL 312
           L + E R   +    +D I   +  G +   + AAE + G     L    L   + +AD 
Sbjct: 199 LNVEEERYRLLARNMSDVISRHNRNGAVRFISPAAENLLGTPVARLAEHGLFDRVHVADR 258

Query: 313 REEGGIRLEFAPGQTTALV--------ARDRAAEAERADGIRF-----PVE--LSVSASE 357
                   + A G+ T  V        ARD       A+ +       P+E  L+ +A+ 
Sbjct: 259 PAYLKAMSDAARGRETGSVEFRIRRDVARDERGRPSAAEFVWVEMRCRPLESNLTTTAAS 318

Query: 358 VEGRRVYTAILRDVTERRRAEAELLAAKEAAEAGNQAKSTFIATMSHELRTPLNAVIGFS 417
             G     A++RD+TER+  E  L  A+  A+  + AKS F+ATMSHELRTPLNA+IGFS
Sbjct: 319 NAGETEVVAVMRDITERKIHEQALDQARAEADRADAAKSRFLATMSHELRTPLNAIIGFS 378

Query: 418 QLLETQAGTAVAGGRQNDLVTDCVGAIRQAGEQLLAIIDDILDMARVDAGGFSLVEGSVN 477
            ++       +   R+ +        I  +G+ LL++++ ILDM+++++G F +V     
Sbjct: 379 DMILQDDVLMLGPERRKEYAQ----LINDSGQHLLSVVNGILDMSKMESGSFEIVPEPFA 434

Query: 478 LSALIERVVADLRFHATRQGVTVDVAADGDLPPIRGDDRRLGQALRNLLSNAIKFSHPGG 537
               +      L   A   G+ +   A  +LP + GD R   Q L NL+SNAIKF+  GG
Sbjct: 435 PRPALLNCCNLLALKARDSGIDLVTRAPENLPEVVGDPRAFKQILLNLVSNAIKFTERGG 494

Query: 538 AVSLSAGLAADGWVELTVRDRGVGMRQEDVAQALTPFGQIDQTVTRRHEGIGLGLPLALR 597
            V++SA +     V L V D GVG+ +ED+ +   PF Q  +T  RRHEG GLGL +   
Sbjct: 495 TVTVSAAVEGTRLV-LRVTDTGVGIAEEDLKRLGDPFFQAGKTYQRRHEGTGLGLSIVKS 553

Query: 598 LVEAHGGTLTLDSAPGQGCTATIRLP 623
           LV  HGG + + S    G T T+ LP
Sbjct: 554 LVRMHGGEIEVQSQIDCGTTVTVSLP 579



 Score = 32.3 bits (72), Expect = 6e-05
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 20/192 (10%)

Query: 131 LRASEARYRTLAEAVPVGILQADSAGQVQFANARLAGITGLEPDRLLGRGWLDAVHPEDR 190
           L   E RYR LA  +   I + +  G V+F +     + G    RL   G  D VH  DR
Sbjct: 199 LNVEEERYRLLARNMSDVISRHNRNGAVRFISPAAENLLGTPVARLAEHGLFDRVHVADR 258

Query: 191 ER-VAADWRLDSGCDAAATDFRF-----HDPDGTGADRRVLCQRIR---LEDGGTIATIT 241
              + A      G +  + +FR       D  G  +    +   +R   LE   T    +
Sbjct: 259 PAYLKAMSDAARGRETGSVEFRIRRDVARDERGRPSAAEFVWVEMRCRPLESNLTTTAAS 318

Query: 242 DVSEYVLTANALRLSEAR-NEAVLDTAADAILTVDEAGVLLSFNRAAEAMFGVAAGDLLW 300
           +  E  + A    ++E + +E  LD A       D          AA++ F       L 
Sbjct: 319 NAGETEVVAVMRDITERKIHEQALDQARAEADRAD----------AAKSRFLATMSHELR 368

Query: 301 RPLDRLIPLADL 312
            PL+ +I  +D+
Sbjct: 369 TPLNAIIGFSDM 380