Pairwise Alignments

Query, 615 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 283 a.a., branched-chain amino acid ABC transporter permease from Castellaniella sp019104865 MT123

 Score =  200 bits (509), Expect = 6e-56
 Identities = 111/284 (39%), Positives = 171/284 (60%), Gaps = 5/284 (1%)

Query: 4   LLVQALSGLATAATLFLVSSGLTIVFGVTRIVNFAHGSFYMVGAYAGWSLIERFGGTPAG 63
           L +  ++GL   A L +V+SGL +++G+ R+VNFAHGS YM+GAY G+S+        AG
Sbjct: 2   LAINIINGLVYGALLAIVASGLALIYGLRRVVNFAHGSLYMLGAYIGYSV-----AIHAG 56

Query: 64  FWGSVAAAALAMGVLGAAMEIGLLRRLYRSPELFQLLGTFGVVLVVQDLTAWAWGPEDLL 123
           FW ++ AA LAM ++G  ++   LR L     L  +L TFG++L+V+DL    WG  +L 
Sbjct: 57  FWAALIAAPLAMFLIGVLLDRYGLRLLRDYDPLSVILVTFGLLLIVEDLVQTIWGKGNLS 116

Query: 124 GRRAPGLKGSIDILDQPFPLYDLVLIGLGPLVLGLLWLLFNRTRWGTLVRAATQDREMTS 183
                 L  S+DI     P Y + ++ +G LV   L    ++TR G  VRA++ D   T+
Sbjct: 117 LAEPDILSHSVDIAGMTLPAYRIAVVVVGVLVAIGLTFWLHKTRMGLFVRASSTDPATTA 176

Query: 184 ALGVDPARLFTGVLFLGCALAGLGGALQVPRESVTLQMDMAIVVEAFVVVVVGGMGSLTG 243
             GV+  RL   V+ LG ALAG  G +  P  S++  M  ++++++F+VVV+GG+GSL G
Sbjct: 177 MQGVNTDRLSAFVVGLGTALAGFAGIVTAPFLSLSPTMGSSVLIDSFMVVVIGGLGSLPG 236

Query: 244 AFLASLLIGQLQAFGILVFPQITLVLVFLFMAVVLVLRPHGLLG 287
           AFL++L++GQ+Q  G    P+I+  L F+ M  +L+ RP G+ G
Sbjct: 237 AFLSALVLGQVQTLGATYLPEISASLPFILMIAILIWRPAGIAG 280



 Score = 41.2 bits (95), Expect = 6e-08
 Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 341 ILALFAASLHLLIGLGGLVSFGHAAWFGLGAYGSALLVKHLSAPMPLALAGAPVLAGLGA 400
           +LA+ A+ L L+ GL  +V+F H + + LGAY    +  H  A    AL  AP+   L  
Sbjct: 15  LLAIVASGLALIYGLRRVVNFAHGSLYMLGAYIGYSVAIH--AGFWAALIAAPLAMFLIG 72

Query: 401 LVAGWFCVRRSGLY---------FAMLTLA--FAQIVW---SIAFQWYAVTGGDNGILGV 446
           ++   + +R    Y         F +L +     Q +W   +++     +      I G+
Sbjct: 73  VLLDRYGLRLLRDYDPLSVILVTFGLLLIVEDLVQTIWGKGNLSLAEPDILSHSVDIAGM 132

Query: 447 WPPGWAAGKATYYWLTLGLCGGALWLLRRAAFAPFGYALRAGRDSGLRAESVGIDVRRFQ 506
             P +    A      L   G   WL +       G  +RA           G++  R  
Sbjct: 133 TLPAYRI--AVVVVGVLVAIGLTFWLHK----TRMGLFVRASSTDPATTAMQGVNTDRLS 186

Query: 507 WMAFVLA-GTAAGLAGGLYAFAKGSVFPTLLAVPQSVDALVMVLMGGIQTVAGPLAGAMV 565
             AFV+  GTA     G+      S+ PT +     +D+ ++V++GG+ ++ G    A+V
Sbjct: 187 --AFVVGLGTALAGFAGIVTAPFLSLSPT-MGSSVLIDSFMVVVIGGLGSLPGAFLSALV 243

Query: 566 FHLLESEVMSLTDWWRLVLGLIIVALVLVF-PKGIVG 601
              +++   +        L  I++  +L++ P GI G
Sbjct: 244 LGQVQTLGATYLPEISASLPFILMIAILIWRPAGIAG 280