Pairwise Alignments

Query, 615 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 293 a.a., branched-chain amino acid ABC transporter permease from Castellaniella sp019104865 MT123

 Score =  187 bits (474), Expect = 7e-52
 Identities = 111/289 (38%), Positives = 173/289 (59%), Gaps = 8/289 (2%)

Query: 5   LVQALSGLATAATLFLVSSGLTIVFGVTRIVNFAHGSFYMVGAYAGWSL---IERFGGTP 61
           L+Q L+ +     LFL++SGLT++FG+  I+N AHGSFYM+GAY  ++L   +++F G  
Sbjct: 7   LIQCLNAVQYGLLLFLIASGLTLIFGIMGIINLAHGSFYMIGAYMAFALQPVVQQFLG-- 64

Query: 62  AGFWGSVAAAALAMGVLGAAMEIGLLRRLYRSPELFQLLGTFGVVLVVQDLTAWAWGPED 121
            GF  +V    L    LG  +E      LY    L Q+L T+G++LV ++L +   G  D
Sbjct: 65  GGFVATVVVCVLLATALGYVLEWAFFSFLYTRDHLQQVLMTYGLILVFEELRSILIG-ND 123

Query: 122 LLGRRAPG-LKGSIDILD-QPFPLYDLVLIGLGPLVLGLLWLLFNRTRWGTLVRAATQDR 179
           + G   P  L GSI +     +P+Y L +  +   V   ++L+  RTR G  +RA   +R
Sbjct: 124 VHGLTLPEWLDGSITLGGVMTYPVYRLFISVVCMAVALSMYLVLTRTRLGMKIRAGASNR 183

Query: 180 EMTSALGVDPARLFTGVLFLGCALAGLGGALQVPRESVTLQMDMAIVVEAFVVVVVGGMG 239
           EM S+LG++  RL+  V  +G +LA L GA+  P  SV   M  ++++ +FV+VV+GG+G
Sbjct: 184 EMISSLGINIQRLYRIVFAIGVSLAALAGAIAAPVTSVYPGMGHSVLIISFVIVVIGGIG 243

Query: 240 SLTGAFLASLLIGQLQAFGILVFPQITLVLVFLFMAVVLVLRPHGLLGR 288
           S+ GAFLA++L+G +  FG + FP I  +L +L MA++L+ +P GL  R
Sbjct: 244 SIRGAFLAAMLVGFVDTFGQVFFPGIAGMLAYLLMALILLFKPQGLFTR 292



 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 26/279 (9%)

Query: 340 VILALFAASLHLLIGLGGLVSFGHAAWFGLGAYGSALLVKHLSAPMPLALAGAPVLAGLG 399
           ++L L A+ L L+ G+ G+++  H +++ +GAY +  L   +   +        V+  L 
Sbjct: 18  LLLFLIASGLTLIFGIMGIINLAHGSFYMIGAYMAFALQPVVQQFLGGGFVATVVVCVLL 77

Query: 400 ALVAGW--------FCVRRSGLYFAMLTLAFAQIVWSIAFQWYAVTGGDNGILGVWPPGW 451
           A   G+        F   R  L   ++T         + F+        N + G+  P W
Sbjct: 78  ATALGYVLEWAFFSFLYTRDHLQQVLMTYGLI-----LVFEELRSILIGNDVHGLTLPEW 132

Query: 452 AAGKATY----------YWLTLGLCGGALWLLRRAAFAPFGYALRAGRDSGLRAESVGID 501
             G  T            ++++     AL +         G  +RAG  +     S+GI+
Sbjct: 133 LDGSITLGGVMTYPVYRLFISVVCMAVALSMYLVLTRTRLGMKIRAGASNREMISSLGIN 192

Query: 502 VRRFQWMAFVLAGTAAGLAGGLYAFAKGSVFPTLLAVPQSVDALVMVLMGGIQTVAGPLA 561
           ++R   + F +  + A LAG + A    SV+P  +     + + V+V++GGI ++ G   
Sbjct: 193 IQRLYRIVFAIGVSLAALAGAI-AAPVTSVYPG-MGHSVLIISFVIVVIGGIGSIRGAFL 250

Query: 562 GAMVFHLLESEVMSLTDWWRLVLGLIIVALVLVF-PKGI 599
            AM+   +++           +L  +++AL+L+F P+G+
Sbjct: 251 AAMLVGFVDTFGQVFFPGIAGMLAYLLMALILLFKPQGL 289