Pairwise Alignments

Query, 509 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 503 a.a., type II secretion system protein GspE from Vibrio cholerae E7946 ATCC 55056

 Score =  260 bits (665), Expect = 7e-74
 Identities = 153/382 (40%), Positives = 224/382 (58%), Gaps = 40/382 (10%)

Query: 149 EDSDPVEQLVS----RAVEAGASDIHILPRRKTCSIFLRVDGIRRLMDETAAATAATIVA 204
           ED  P+ +L++     A++ GASDIHI    KT SI  RVDG+ R +   +   ++ +V+
Sbjct: 118 EDDAPIIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVS 177

Query: 205 RIKDRSGMDLAERRLPQEGRFEVEHRGRPVDLRVTTVPSVDGEIIVMRILDVERVQPNLD 264
           R+K  + +D+AE+R+PQ+GR  +   GR VD+RV+T+PS  GE +VMR+LD    + +L 
Sbjct: 178 RVKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLH 237

Query: 265 RLGIS--HVGDWRRAVDRRHGLCLVCGPTGSGKSTTLTATVREMDRLGRAIYSIEDPVEY 322
            LG++  +  ++RR + R HG+ LV GPTGSGKSTTL A ++E++   R I ++EDP+E+
Sbjct: 238 SLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEF 297

Query: 323 RMAYTGQVNVNPAVKLDFARVVRTFMRADPDVIVLGEVRDEETAQIAVRAADTGHMVLTT 382
            +   GQ  VNP V + FAR +R  +R DPDV+++GE+RD ETAQIAV+A+ TGH+V++T
Sbjct: 298 DIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMST 357

Query: 383 LHTGSVNGAIDRLRHLGVPAHDIKSLLRGVLVQSLVRTICRAC----------------- 425
           LHT +  GA+ RLR +G+    I S L GVL Q LVRT+C  C                 
Sbjct: 358 LHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFDSK 417

Query: 426 --------HGAGCAACGNAGYAGRTAVSECAVFDE--------PAAVVAAAKGAR-NWRS 468
                      GC  C + GY GRT + E  + D+         A   A  K  R    S
Sbjct: 418 KKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPS 477

Query: 469 LYEDAVAKFHAGVTTAAELRRV 490
           + +D + K   G+T+  E+ RV
Sbjct: 478 IRDDGLDKVRQGITSLEEVMRV 499