Pairwise Alignments

Query, 386 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 335 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (326), Expect = 7e-35
 Identities = 96/338 (28%), Positives = 159/338 (47%), Gaps = 26/338 (7%)

Query: 6   LAPLLGGGLLAGGLLGGPAAAQDLRYFRIGTGTTSGTYFPIGGLIANA--ISNPPGSRPC 63
           L   L   + + GL+GG  AA++  Y  + T +T GTY+P+G  +A    +   P     
Sbjct: 6   LTQTLLAAITSFGLIGGAYAAEERSYI-LATASTGGTYYPVGVALATLTKVKLTPSYH-- 62

Query: 64  DKGGSCGIPGLIVVAQASNGSVDNVEMLRAGTVEAGFAQADVAYWAYSGTGSFTGKRPFT 123
                       + A +S GS +NV+++     +    Q     WA++G G +  ++   
Sbjct: 63  ----------FSLSAISSAGSGENVKLMNDNEAQFAILQGLYGAWAWAGEGPYAERQ--N 110

Query: 124 ELRSLGMLYAEAIQIVVRSD----GFIDRMADLKGRSISLGEEGSGTLVEARLILDAYGL 179
           +LRS+ ML+      +VRSD    G I  +A +KG+  S+G + SGT    R I+   G+
Sbjct: 111 QLRSVSMLWQNVEHFIVRSDLAPTGTIADLASMKGKKFSIGSKNSGTEFSGRQIMKGVGV 170

Query: 180 SESTITPLYLKPGTAADRLAKGELDGFFMVGGYPVAAVSDVAARV--PIRLVPLDGEPAD 237
              T    YL  G +A  L  G +DG     G PV AV+   A +   I+++    E   
Sbjct: 171 DPDTFNLAYLGYGGSASALQNGTIDGMNTPAGVPVGAVTQAFAAMGNDIKILSFTDEQIK 230

Query: 238 RLLRSQRFYIEQEIPANAYPGSANT-PTLSLGAELLTRADRDPDLIYGVVRALWHENTRR 296
           +   +   + + +IPAN YPG   T  T++    L  R D   + +Y + +A+ +EN   
Sbjct: 231 QANGNYNLWTKFDIPANTYPGVDKTITTIAQPNFLAVRTDISEEDVYQLTKAM-YENL-A 288

Query: 297 VLADGHPQGRNFDPARAVANVSVPLHPGAERFYREAGL 334
            L   H   ++    +A+  + +PLH GA R+Y+E G+
Sbjct: 289 FLQGIHKATKDMAIEKAIEGLPMPLHAGAARYYQEVGI 326