Pairwise Alignments

Query, 386 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 325 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxoglutarate, solute receptor component (from data) from Marinobacter adhaerens HP15

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 72/317 (22%), Positives = 124/317 (39%), Gaps = 26/317 (8%)

Query: 23  PAAAQDLR----YFRIGTGTTSGTYFPIGGLIANAISNPPGSRPCDKGGSCGIPGLIVVA 78
           PA AQD       F +GT +  GTYF  G   AN ++   G      GG          A
Sbjct: 20  PATAQDRSDWPSNFTVGTASQGGTYFAYGSGWANFVAENLGV----SGG----------A 65

Query: 79  QASNGSVDNVEMLRAGTVEAGFAQADVAYWAYSGTGSFTGKRPFTELRSLGMLYAEAIQI 138
           + + G V N+ ++  G ++ G      A  +  G            + ++  +Y     +
Sbjct: 66  EITGGPVQNMALVHTGDLKFGLTTMGPARESMDGNSPLAPGMKMDNVCAMFPMYETPFSV 125

Query: 139 VVRSDGFIDRMADLK-GRSISLGEEGSGTLVEARLILDAYGLSESTITPLYLKPGTAADR 197
              S   I  +AD+  G +I  G  GS +      +++  G++       +   G    +
Sbjct: 126 TALSSSGITSIADIPDGATIGFGPAGSTSDTYFPRMMETLGVNFERRNGSWSDLG---GQ 182

Query: 198 LAKGELDGFFMVGGYPVAAVSDVAARVPIRLVPLDGEPADRLLRSQRFYIEQEIPANAYP 257
           L  G +D      G P+ AVS +  +  + ++ ++   A+ ++ S     E  IPA+ Y 
Sbjct: 183 LQDGLIDVVAFAAGIPIPAVSQLEVQTDVNIIGMNDAEAETII-SNFPVSEFIIPASTYQ 241

Query: 258 G-SANTPTLSLGAELLTRADRDPDLIYGVVRALWHENTRRVLADGHPQGRNFDPARAVAN 316
              A +  +S+    +   D     +Y + +     N + V    H   RN  P     N
Sbjct: 242 SLDAPSRVVSMWNFAMVNCDVSESFVYEITKLTMENNDKMVSI--HKAARNSVPENYTKN 299

Query: 317 VSVPLHPGAERFYREAG 333
             +P HPGA R++ E G
Sbjct: 300 NVLPWHPGAARWFNENG 316