Pairwise Alignments

Query, 498 a.a., Cytochrome c oxidase subunit 1, bacteroid from Azospirillum sp. SherDot2

Subject, 475 a.a., cytochrome-c oxidase cbb3-type subunit I from Pseudomonas aeruginosa PA14

 Score =  639 bits (1649), Expect = 0.0
 Identities = 295/453 (65%), Positives = 359/453 (79%), Gaps = 3/453 (0%)

Query: 23  YHEDAIRLFVIAAVFWGVVGFLAGTFIALQLAFPALNLGLEWTSFGRLRPVHTSAVIFAF 82
           Y+   +R F I  V WG+VG   G  IA QL +P LN GL WTSFGRLRP+HT+AVIFAF
Sbjct: 10  YNYKVVRQFAIMTVVWGIVGMTVGVLIAAQLVWPDLNFGLPWTSFGRLRPLHTNAVIFAF 69

Query: 83  GGNVLFATSLYSVQRTCRQYLFGGEGLAKFIFWNYNVFIVLAALSYVLGFTQGKEYAEPE 142
           GG  LFATS Y+VQRTC+  LF  + LA F FW + + I+LAA+S  LG+T  KEYAE E
Sbjct: 70  GGCALFATSYYAVQRTCQVRLFS-DTLASFTFWGWQLVILLAAISLPLGYTSSKEYAELE 128

Query: 143 WILDLYLTVTWVLYAVQFIGTVMTRRESHIYVANWFFMAFILTVAILHIGNNINIPVSLF 202
           W +D+ +TV WV YAV F GT++ R+  HIYV NWFF  FILTVA+LH+ NN+ +PV+  
Sbjct: 129 WPIDILITVVWVAYAVVFFGTLVKRKVKHIYVGNWFFGGFILTVAMLHVVNNLELPVTF- 187

Query: 203 GMKSYTFVSGVQSAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKRAERPVYSYRLSIVHFW 262
             KSY+  +G   AMVQWWYGHNAVGFFLTAGFLG+MYYFVPK+AERPVYSYRLSIVHFW
Sbjct: 188 -TKSYSLYAGATDAMVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFW 246

Query: 263 TLIFLYIWAGPHHLHYTSLPDWAQTLGMTFSVMLWMPSWGGMINGIMTLSGAWDKLRTDP 322
            LI +YIWAGPHHLHYT+LPDWAQ+LGM  S++L  PSWGGMING+MTLSGAW KLR+DP
Sbjct: 247 ALIAVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDP 306

Query: 323 VLRFLVTSVAFYGMSTFEGPLMSVKPVNALSHYTDWTIGHVHSGALGWVAFVSFGAIYYL 382
           +LRFLV S+AFYGMSTFEGP+M++K VNALSHYTDWTIGHVH+GALGWVA VS G++Y+L
Sbjct: 307 ILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGSLYHL 366

Query: 383 VPVLWKRSQLYSMRLVSYHFWTATIGIVLYITAMWVSGIMQGLMWRAYDNLGFLQYSFVE 442
           +P ++ R ++YS+ L++ HFW ATIG VLYI +MWV+GI QGLMWRA +  G L YSFVE
Sbjct: 367 IPKVFGREKMYSLGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAVNEDGTLTYSFVE 426

Query: 443 TVAAMHPFYVIRAMGGVLFVTGALIMVYNLWRT 475
            +AA HP +++R +GG +F+ G  +M YN WRT
Sbjct: 427 ALAAGHPGFIVRMLGGFIFLLGMFLMAYNTWRT 459