Pairwise Alignments

Query, 498 a.a., Cytochrome c oxidase subunit 1, bacteroid from Azospirillum sp. SherDot2

Subject, 533 a.a., membrane protein from Cupriavidus basilensis FW507-4G11

 Score =  238 bits (607), Expect = 4e-67
 Identities = 142/443 (32%), Positives = 226/443 (51%), Gaps = 21/443 (4%)

Query: 30  LFVIAAVFWGVVGFLAGTFIALQLAFPALNLGLEWTSFGRLRPVHTSAVIFAFGGNVLFA 89
           LF+  A+ W VV  LAG   +++L  P L   + W SFGR+R +H +AV + +      +
Sbjct: 83  LFICCAMVWLVVASLAGLTASVKLHEPDLLASVPWLSFGRIRTIHLNAVAYGWAPMAGLS 142

Query: 90  TSLYSVQRTCRQYLFGGE-GLAKFIFWNYNVFIVLAALSYVLGFTQGKEYAEPEWILDLY 148
            +L+ + R  +  L G +  +     WN  +   L +++   G + G E+ E  W +D+ 
Sbjct: 143 IALFLLPRLLKTRLAGAKYAVLGAALWNAGLIAGLGSIA--AGISDGLEWLEIPWQVDIL 200

Query: 149 LTVTWVLYAVQFIGTVMTRRESHIYVANWFFMAFILTVAILHIGNNINIPVSLFGMKSYT 208
           L     L  +  + T++ R+  H+YV+ W+    +    +L +    NIP   FG     
Sbjct: 201 LVAGGALVGMPLVLTLVNRKVDHLYVSVWYMGCALFWFPVLFLV--ANIPGLHFG----- 253

Query: 209 FVSGVQSAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKRAERPVYSYRLSIVHFWTLIFLY 268
               V+ A + WW+GHN +G F T   L  +YYF+PK   +PV SY LS++ FW L F Y
Sbjct: 254 ----VEQATMNWWFGHNVLGLFYTPLALASIYYFLPKIIGQPVRSYGLSLLGFWALAFFY 309

Query: 269 IWAGPHHLHYTSLPDWAQTLGMTFSVMLWMPSWGGMINGIMTLSGAWDKLRTDPVLRFLV 328
              G HHL    +P W  TL +  S+M+ +P     IN   T+ G + +L   P LRF+ 
Sbjct: 310 GQVGGHHLIGGPVPGWLITLSIVQSMMMLVPVIAFSINQHQTMRGHFHRLIDSPTLRFVT 369

Query: 329 TSVAFYGMSTFEGPLMSVKPVNALSHYTDWTIGHVHSGALGWVAFVSFGAIYYLVPVLWK 388
                Y +S+ +G   +++ VN ++H+T +T+ H H G  G+V+F  FGAIY++VP +  
Sbjct: 370 FGGMMYTLSSAQGSFEALRAVNRVTHFTHYTVAHAHLGLYGFVSFAFFGAIYFMVPRVTG 429

Query: 389 RSQLYSMRLVSYHFWTATIGIVLYITAMWVSGIMQGLMWRAYDNLGFLQYSFVETVAAMH 448
           R   Y   L+  HFW A  GI +Y   + + G +QG     Y  L      F+++VA   
Sbjct: 430 REWPYRW-LIYAHFWLAVAGIGVYFIGLSIGGTLQG-----YAMLD-ASKPFMDSVAVTI 482

Query: 449 PFYVIRAMGGVLFVTGALIMVYN 471
           P+   R++GG + + G L  V N
Sbjct: 483 PYLKARSVGGGMMLLGHLCFVAN 505