Pairwise Alignments

Query, 551 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 653 a.a., phage terminase GpA from Marinobacter adhaerens HP15

 Score =  180 bits (457), Expect = 1e-49
 Identities = 155/503 (30%), Positives = 227/503 (45%), Gaps = 68/503 (13%)

Query: 1   MLRDTPVLKPLMRPTRKGEKQDNATFYQLSNGASVRVVGAASDDAFRRYSARFLFADEID 60
           M+   PVL+ L+   R  E  +N        G  +    A S    R  SA  + ADEID
Sbjct: 127 MVDTNPVLQDLIAKPRSHEGVNNQRMKSYPGGFMM-YAWAGSTKTMRGRSAPLIVADEID 185

Query: 61  GDGWTPGAKTQGDKLKLFWTRGETFWNRKQ-VRGSTPLLYETSRVWKLWLASDQRRYFVP 119
           G G TP    +GD+++L W R  TF +++  +  STP + + SR+   +L  DQR ++V 
Sbjct: 186 GYGGTP----EGDEVQLLWQRAATFGDQRLLIEISTPTIKDESRIEAAFLQGDQRHFYVA 241

Query: 120 CPQCSDAAGQLDGWQYLDWG----GPDVPHGLKWSLDAEGTLDKVWYVGTCGCIVEERHK 175
           CP C     Q   W  + W     G  +P   ++  +  GTL   W  G     +    +
Sbjct: 242 CPHCDHH--QRLNWDRVTWDKDEDGHHLPETARYICEECGTL---WNDGERIAAIRTAEQ 296

Query: 176 AWMDANGEWRPTARAKVPGHVGMHLWTGMSLNPNAAWTVIVQEWLEAQADPASLVQPFMN 235
                   W+  A     GH   HL    S         IVQ +L+ +A  A+ +Q F+N
Sbjct: 297 V----GAGWK--ASKPFRGHASYHLNELYSCFRRLR--DIVQSFLDKKA--ANDLQSFVN 346

Query: 236 LRLGRPYRAIYGQEVKSSSFIDRMEPYPAEVPAGVEFITVGVDVQSGKVNPRLEASVYGW 295
           + L   +    G++  S   + R E YP  VPAG   +T G+D+Q      RLE     W
Sbjct: 347 VSLAETWEE-QGEQADSHVLMQRAEEYPDPVPAGGVVLTSGIDMQQD----RLEVETVAW 401

Query: 296 GRGLEVWLIGHFVLAGDPAKGEVWAALDEGVLLRRFRKPDGTTLDVRATCIDSGGH--HT 353
           GRG E W I + VL GDP + EVW  LD+  L   ++   G  L + A C+D+GG   +T
Sbjct: 402 GRGEESWSIDYTVLWGDPLRDEVWQDLDD-YLATTWKHESGAHLGIIAACLDTGGSTGYT 460

Query: 354 QEVYAFANKRRSRRVWAIKG--------------RSESRGQRAKVWPRKPSSKLGHVWYM 399
           Q  Y +A ++  RR++AIKG              +   RGQR KV             + 
Sbjct: 461 QRAYEYARRKTGRRLFAIKGVGGWDRPVVTAPSRKRTGRGQR-KV-----------DLFS 508

Query: 400 IGGNAARDWAYGSLAVDKIGPRHVHFPQAAIDGARELDDEFFAQLTREKLIVP--RGQQY 457
           +G + A+      LAV + GP + H P        + + E+F Q+T EKL+    +G   
Sbjct: 509 VGTDEAKLTVMRRLAVTEPGPGYTHIP-------ADREAEWFHQITAEKLVTKYIKGVAK 561

Query: 458 TVWVKPSEAHEAGVCFVYAYAAV 480
             W +    +EA  C VYAYAA+
Sbjct: 562 REWHQTRPRNEALDCRVYAYAAL 584