Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 512 a.a., Phage integrase family. from Pseudomonas stutzeri RCH2

 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 13/245 (5%)

Query: 133 TAEGYLTTLKMIEDYAIRRGYTKKRIVRDYRLDFASSKKKKIRIPAIEEILSILKVVDER 192
           T +GYL +L+ +  +A R     ++   D    F      ++   +     +  +   E+
Sbjct: 273 TRQGYLWSLRKLHKWACRYDQPYRQQFADKPSPFDGHTHPRVGKGSGGSWAAFTRQEAEQ 332

Query: 193 -PRNYVIRGHMLLRCFVHLAAFCGLRYGEIAGLTKDNIDLDNRIIMVRHSLTSWDELKEP 251
             R  V +    L   +  A F G R  E+  ++ +    D++   V         + + 
Sbjct: 333 LHRAAVAKQDTDLADLIAFACFTGCRIEELGRISTNTTLFDDQGEPVAF------RVDDA 386

Query: 252 KTEAGVRNVPIPAHIVALLKEWIEKHQLINERDLVFRTSTGCPINSGNFHTHFWHPLLKR 311
           KT+AG+R +PI + ++ L K  ++  +       V    T   I        F    LKR
Sbjct: 387 KTKAGIREIPIASALLHLYKSRLKLAEAPGGYLFVGNDKTKSGIRLNALSQRFTK--LKR 444

Query: 312 AGLYSTDGDQLHFHALRHFTVSFMLNQGIPVTEVSRHVGHSRSDITLNTYAHALANDGQR 371
              +S   DQ  FH+ R  T + +   G P   +   +GH+R  I+ + Y+   + D Q+
Sbjct: 445 GEGFS---DQHVFHSFRKLTATQLEQAGAPALTIPSILGHTRGHISFDVYSSGASFD-QK 500

Query: 372 QEAMD 376
           + A++
Sbjct: 501 KAAIE 505