Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 419 a.a., integrase arm-type DNA-binding domain-containing protein from Castellaniella sp019104865 MT123

 Score = 51.2 bits (121), Expect = 6e-11
 Identities = 89/372 (23%), Positives = 148/372 (39%), Gaps = 60/372 (16%)

Query: 28  GKRRLKTFDRKKEADAYRLKVETEIEKGEHTADGSSATVARVCDQFIKSAEERYKAGSIG 87
           G + +   DR K A+  R K E EIE     AD  + +   + D ++   +  +      
Sbjct: 84  GAQPVGMVDRIKAAN--RAKTEDEIEAERVAADALAHSFTMLSDAWLADRKPGW-----A 136

Query: 88  TSTFYKYRLAVDRYIIPAIGSRRFNSLSWSDLEALQRGFSKVSPATAEGYLTTLKMIEDY 147
           T+T+ K    V + + P IG+    +++  D+  +       +P+ A      L  + +Y
Sbjct: 137 TATYDKAVFIVRKRLQPFIGTLDVRTMASKDVVDVLHQMGTDAPSLARKARQYLNGVIEY 196

Query: 148 AIRRGYTKKRIVRDYRLDFASSKKKKIRIPAIEEILSI---LKVVDERPRNYVIRGHMLL 204
           +I+RG      V   RL     K +   IPAI ++  I   ++ VD  P   ++R  +L 
Sbjct: 197 SIQRGMRGDDQV--LRLRGVLPKYRSGHIPAITKVQGIGPLMRAVDTYP-GVIVRAGLL- 252

Query: 205 RCFVHLAAFCGLRYGEIAGLTKDNIDLDNRIIMVRHSLTSWDELKEPKTEAGVRN---VP 261
                LAA+   R G +A      IDLD              E   P  +  +R+   V 
Sbjct: 253 -----LAAYTACRPGVVASAAWSEIDLDRA------------EWTIPAAKMKMRHEHIVS 295

Query: 262 IPAHIVALLKEWIEKHQLINERDLVFRTSTGCPINSGNFHTHFWHPLLKRA-------GL 314
           +P   VALL    +  +  ++ + VF      P +  N H H     L +A       G 
Sbjct: 296 LPTQAVALL----QGVRQYSDGEYVF------PGSQSNEHMH--RDALSKALRDMGFKGR 343

Query: 315 YSTDGDQLHFHALRHFTVSFMLNQGIPVTEVSRHVGHSRSDITLNTYAHALANDGQRQEA 374
           ++T G    F A+        L   + V E    + H++ D     Y  A   D +R++ 
Sbjct: 344 HATHG----FRAMLRTVARERLKIDVDVLEA--QLAHAKKDEIQAAYDRARFED-ERRQV 396

Query: 375 MDRIADVLLDRA 386
           M   AD L ++A
Sbjct: 397 MQTWADFLQEQA 408