Pairwise Alignments

Query, 353 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 422 a.a., integrase, putative from Pseudomonas fluorescens FW300-N2E2

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 68/254 (26%), Positives = 103/254 (40%), Gaps = 25/254 (9%)

Query: 100 LLNRIEKVAGNKLVASITRAWLVTGYEAVQKKSGLATANAVMRVWRIVLGHACDRGMIDV 159
           L N I    G K ++ I    + T    ++++  +A A  V  + R VLG A  RG ++ 
Sbjct: 142 LNNHILPAIGKKPISEIKLEHITTIITELRRQRTMAMARRVRTIIRAVLGFAEGRGWVER 201

Query: 160 SPADG------MRLIGTQARTQLWTPDQVETFCAAAIEAGRESLALAVRLALDIGQRQGD 213
           + A        +R I T +   +  P  +  F     +    S+A A+RL + +  R G+
Sbjct: 202 NVALSNIEELKIRHIVT-SNPAIERPSDLGRFLLRLDDCNDGSVATAMRLLVMLPVRPGE 260

Query: 214 ILALKWSDYD--GTAFSLVQGKTKHALR----VPVTPSMQALLGKVKRDAV-------QV 260
           ++ ++W D D  G  +  V  KTKH  +    VP+      LL ++ +  V        V
Sbjct: 261 LVQMRWEDVDLVGADWRYVVSKTKHLDKSKHIVPLPEQALVLLRELHKTRVVDEEGKGWV 320

Query: 261 IVSEA-TGRPYQKFHFGHEFARIRALAQLPAELQFRDLRRTAATELGAAGATDDEIRAVT 319
            VS    GRP         F RI     + A   FR   RT A E    G     +    
Sbjct: 321 FVSPVYPGRPINPTSMLKSFQRIWPEYDITAH-GFRATYRTIAHE--HLGIDPIVLELSL 377

Query: 320 GHRSRGVV-AVYVR 332
            HR  G + AVY R
Sbjct: 378 SHRMPGALGAVYAR 391