Pairwise Alignments

Query, 353 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 386 a.a., integrase from Azospirillum brasilense Sp245

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 14/243 (5%)

Query: 109 GNKLVASITRAWLVTGYEAVQKKSGLATANAVMRVWRIVLGHACDRGMIDVSPADGMRLI 168
           G++ VA IT A  V    A   ++    AN V+ V +  +  A        +P  G+R  
Sbjct: 135 GSEKVADIT-AQDVDALHAWISQTKPVRANRVIEVLKTAMFLAIRWKWRSDNPVSGVRRN 193

Query: 169 GTQARTQLWTPDQVETFCAAAIEAGRESLAL-AVRLALDIGQRQGDILALKWSDYDGTAF 227
               R +  +P ++    + A+EA  E  +  A+RL L  G R+ ++LA KWS +D    
Sbjct: 194 HEDKRERYLSPKEMVAL-SEALEAHSEKASCDAIRLMLLTGARKTEVLAAKWSMFDLDEG 252

Query: 228 SLVQ----GKTKHALRVPVTPSMQALLGKVK---RDAVQVIVSEATGRPYQKFHFGHEFA 280
             V+     K K   RVP++ +   LL ++K    D V V      G+P         +A
Sbjct: 253 VWVKPSAHTKQKKTHRVPLSSAAVELLRRIKAEGADPVFVFPGRVAGKPLGDIK--RTWA 310

Query: 281 RIRALAQLPAELQFRDLRRTAATELGAAGATDDEIRAVTGHRSRGVVAVYVRP-DDRMAA 339
            + A A+L   ++  DLR T A+ L +       I A+ GH        Y    DD + A
Sbjct: 311 VLCAKAEL-KNVRIHDLRHTFASVLASNNLGLPIIGALLGHTQAQTTQRYAHLFDDPLRA 369

Query: 340 AAQ 342
           AA+
Sbjct: 370 AAE 372