Pairwise Alignments

Query, 240 a.a., Aerobic respiration control protein ArcA from Azospirillum sp. SherDot2

Subject, 275 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  171 bits (433), Expect = 1e-47
 Identities = 99/240 (41%), Positives = 139/240 (57%), Gaps = 4/240 (1%)

Query: 1   MGQKKRIYVIEDEADIRRLVTEVLESYGYEVTGWANGREARTAIQRQAPDLCLVDLGLPD 60
           M   + I V++D+ +IR L+T  L+ +G+     A+G E    ++    DL ++D+ LP 
Sbjct: 1   MNTPEHILVVDDDPEIRALLTGYLDKHGFRAESAADGSEMFRMLEVGRYDLVVLDVMLPG 60

Query: 61  MDGLTLVRELWEDVRFGVIILSGRGGTSDRVLGLELGADDYIVKPFEPRELVARVNSAIR 120
            DGLTL R+L       VI+L+     +DR++GLELGADDY+ KPF PRELVAR+ + +R
Sbjct: 61  DDGLTLCRKLRARSELPVIMLTALDDDTDRIIGLELGADDYVAKPFNPRELVARIRTVLR 120

Query: 121 RR----EQLAGATAAAETARARFGPWVFDLGNLTLTADDGRQESLTAAEASLLLMLLKAP 176
           R     E +A A   A +   RF  W  D     L A DG   +L+ AE  LL   LK P
Sbjct: 121 RARALPENIAKAEPEAMSRTIRFAGWTLDTVPRHLVAPDGVVVNLSGAEYRLLRFFLKYP 180

Query: 177 KRVLSREHLQGPDQDRDDFPYDRSIDVRISRIRKKIEEDPRAPRLIKTVYGAGYLFAGDV 236
            RV+SR+ L    Q R    +DRSIDV +SR+R ++ ++ R P++IKTV G GY  A DV
Sbjct: 181 NRVMSRDQLLDLTQGRAAEAFDRSIDVLVSRLRTRLRDNGREPQIIKTVRGDGYYLATDV 240