Pairwise Alignments

Query, 542 a.a., Cytochrome c oxidase subunit 1 from Alteromonas macleodii MIT1002

Subject, 477 a.a., cytochrome-c oxidase, cbb3-type subunit I from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 9e-19
 Identities = 57/259 (22%), Positives = 120/259 (46%), Gaps = 20/259 (7%)

Query: 212 LFVWTWLITAFLLIAVMPVLAGAVTMVLTDKFFGTSFFDAAGGGDPVMFQHIFWFFGHPE 271
           ++V  W   AF++   +  +  ++ + ++    G S+   AG  D +    + W++GH  
Sbjct: 161 IYVANWFFGAFIITVAVLHIVNSMALPVS---MGKSYSIYAGAVDAM----VQWWYGHNA 213

Query: 272 VYIMILPAF-GIISQIVPTFSRKQLFGYA-SMVYATASIALLSFVVWA--HHMFTTGMPV 327
           V  ++   F G++   VP  + + ++ Y  S+V+  A   L+S  +WA  HH+  T +P 
Sbjct: 214 VGFLLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWA---LISLYIWAGPHHLHYTALPD 270

Query: 328 YMEMFFMFATMLISVPTGVKVFNWVATM---WRGSLSFEMPMMFAIAFIVLFTIGGLSGL 384
           + +   M  ++++  P+   + N + T+   W   L ++  + F I  +  + +    G 
Sbjct: 271 WTQSLGMVMSLVLFAPSWGGMINGIMTLSGAWH-KLRYDPILRFLIVSLSFYGMSTFEGP 329

Query: 385 MLAITPVDFQYHDTYFVVAHFHYVLVTGAVFSIMAAVYYWLPKWTG--KMYDTTLAKWHF 442
           M++I  V+   H T + + H H   +       + +VY+ +P+  G  +MY  +L   HF
Sbjct: 330 MMSIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSVYHLIPRLFGQERMYSVSLINAHF 389

Query: 443 WCSLVSVNVLFFPMHFVGL 461
           W + +   +    M   G+
Sbjct: 390 WLATIGTVLYIVAMWISGV 408