Pairwise Alignments

Query, 333 a.a., Galactose operon repressor from Alteromonas macleodii MIT1002

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N1B4

 Score =  198 bits (504), Expect = 1e-55
 Identities = 118/335 (35%), Positives = 183/335 (54%), Gaps = 6/335 (1%)

Query: 1   MATIYQVSEAAGVSLATVSRVMNGNAKVSERTRKKVEDAMASLGYQPNAIAQSLASNRTN 60
           MATI  V+  AG+S  TVS V+N    VSE  R KVE A+ SL Y P+A+A+SL +  T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRVKVEAAIKSLDYVPSAVARSLKAKTTA 60

Query: 61  SVGLLVSELHGSYFGDLMSTVEHVLKQNGKHVIITAGHVDEKREHEAIEFLKSRRCDALI 120
           ++GLLV      YF +L   +E   ++NG  VI+     +  ++   +  L  +R D LI
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI 120

Query: 121 LHAEAVSDDYLKTLVDSKIPVVVINRKVDALDENCFVVDNERGGYMATKAAIDAGHKKIA 180
           + +        + L   + P+V+++R ++ LD +   +D+E G Y+AT+  +D GH+ IA
Sbjct: 121 VASAGGDSGLAEGLAGVRTPMVIVDRGLEGLDADLVRIDHEYGAYLATRHLLDLGHRDIA 180

Query: 181 YISGPLFKKDASDRLAGHKRALQEAGVTFRENSVFEGDFHESSGQEGMQHLQRTFSDFTA 240
            I GP     A  RLAG+ RAL+EAGV      + E DF  + G      L    +  +A
Sbjct: 181 TIGGPASTSVAQMRLAGYCRALKEAGVEVPRERMLESDFTSTGGYNAAAILLEN-NPPSA 239

Query: 241 LVCANDEMASGAMTAAREAGFDIPSQLSIIGFDNVLFSRYLYPKLTTINNPIHAMGEMAA 300
           +   ND +  G + AA E    +P++LS+IGFD++  SRY+YP LTT+   I  +GEMAA
Sbjct: 240 IFAGNDMIGIGVLRAAAERNIRVPTELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMAA 299

Query: 301 YWVLQHVY--DIKSPIPIEHLFEPEVVNRDTLGKL 333
             +L+ +   D+ +    + +  P +V R++   L
Sbjct: 300 EVLLRRIATPDLATD---QRIVTPNIVLRESTAPL 331