Pairwise Alignments

Query, 333 a.a., Galactose operon repressor from Alteromonas macleodii MIT1002

Subject, 332 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  368 bits (944), Expect = e-106
 Identities = 185/330 (56%), Positives = 237/330 (71%), Gaps = 1/330 (0%)

Query: 1   MATIYQVSEAAGVSLATVSRVMNGNAKVSERTRKKVEDAMASLGYQPNAIAQSLASNRTN 60
           MATIY VS  AGVSLATVSRV+N   KVS++TR+KV DAMA L Y+PN IAQSLASNR+N
Sbjct: 1   MATIYDVSFLAGVSLATVSRVVNNTGKVSDKTRQKVHDAMAKLDYRPNTIAQSLASNRSN 60

Query: 61  SVGLLVSELHGSYFGDLMSTVEHVLKQNGKHVIITAGHVDEKREHEAIEFLKSRRCDALI 120
           S+G+LVS+L G ++G +M  VE  L+   KHVII AGH D  +E + +EFL SR CDALI
Sbjct: 61  SIGVLVSQLDGPFYGPMMREVESALRAANKHVIIAAGHSDAAQEKDGVEFLLSRGCDALI 120

Query: 121 LHAEAVSDDYLKTLVDSKIPVVVINRKVDALDENCFVVDNERGGYMATKAAIDAGHKKIA 180
           + AE +S+ YL  L   K PVV+INR VD +DE C  ++N +GG +A++  ++ GHK+IA
Sbjct: 121 VDAEILSNGYLVELCQGKTPVVLINRHVDGIDERCVHLNNLQGGLLASRHVLEKGHKQIA 180

Query: 181 YISGPLFKKDASDRLAGHKRALQEAGVTFRENSVFEGDFHESSGQEGMQHLQRTFSDFTA 240
           YISGPLFK DA +RL GH++AL E G+ F EN  +EGDF E  G E M  L     DFTA
Sbjct: 181 YISGPLFKLDARERLEGHRQALAEQGIAFDENLFYEGDFREEGGYEAMAQLLSRGRDFTA 240

Query: 241 LVCANDEMASGAMTAAREAGFDIPSQLSIIGFDNVLFSRYLYPKLTTINNPIHAMGEMAA 300
           +VCAND+MASGA+    E G  +P  +S +GFDN+ F RY+ PKLTT+ NPI  MG MAA
Sbjct: 241 VVCANDQMASGAIAQCLERGLRVPEDISFVGFDNIPFPRYISPKLTTVCNPIQDMGRMAA 300

Query: 301 YWVLQHVYDIKSPIPIEHLFEPEVVNRDTL 330
           +WVL+ VYD ++ +   H FEPE+V RD++
Sbjct: 301 HWVLREVYD-QTDVTFCHRFEPELVVRDSV 329