Pairwise Alignments

Query, 400 a.a., Na(+)-translocating NADH-quinone reductase subunit B from Alteromonas macleodii MIT1002

Subject, 348 a.a., electron transport complex subunit D from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (335), Expect = 7e-36
 Identities = 93/272 (34%), Positives = 134/272 (49%), Gaps = 50/272 (18%)

Query: 154 VTSVLFALTLPATIPLWQVALGITFGVVIAKEVFGGTGRNFLNPALSGRAFLYFAYPAQI 213
           VT+ L A+ +P   P W V +G+ F +VIAK ++GG G+N  NPA+     L  ++P Q+
Sbjct: 80  VTAWLLAVAIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMIAYVVLLISFPVQM 139

Query: 214 SGDQVWVA-----------ADGYS--------GATSLSQAASGNLDYANMDQWMNSFIGT 254
           +    W+A            D +S           SL Q  +G +D   M   +++F  +
Sbjct: 140 TS---WMAPIKLTAEPSSLVDSFSLIFGGFDSDGLSLQQIRTG-IDGITMATPLDAFKTS 195

Query: 255 I---------------SGSAG---EVSTLAIILGGLFIMYMRIASWRIVAGVAIGVAFFA 296
           +               SG AG   E   +A +LGGL ++ +RI  W I   +  G+ F A
Sbjct: 196 LKAGHTMSETLTQPQFSGFAGIGWEWVNIAYLLGGLILLKLRIIRWHIPMAMLAGLVFTA 255

Query: 297 TLLNLI--GSDTNPMFAMPAHWHFVVGGLAFGMFFMATDPVSASFTNQGKWAYGIFIGFM 354
            L  L   G+  +PM       H + G    G FF+ATDPVSAS T++G+  YG FIG M
Sbjct: 256 LLAQLFAPGTTASPMI------HLLSGATMLGAFFIATDPVSASTTDKGRLIYGFFIGAM 309

Query: 355 TVLIRVLNPAFPEGVMLAILFANLWAPLFDYF 386
             LIR     FP+GV  A+L AN+  PL DY+
Sbjct: 310 VFLIRSWG-GFPDGVAFAVLLANMCVPLIDYY 340