Pairwise Alignments

Query, 254 a.a., Na(+)-translocating NADH-quinone reductase subunit C from Alteromonas macleodii MIT1002

Subject, 257 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit C from Vibrio cholerae E7946 ATCC 55056

 Score =  245 bits (625), Expect = 7e-70
 Identities = 130/252 (51%), Positives = 174/252 (69%), Gaps = 9/252 (3%)

Query: 1   MSAKKESLGKTVGIVVAVCLVCSIVVSGAAVGLRSLQQTNAALDKKSNILNAAGLYEMGM 60
           M++  +S+ KT+ +V+A+ LVCSI+VS AAVGLR  Q+ NAALDK+S IL  AG+   G 
Sbjct: 1   MASNNDSIKKTLFVVIALSLVCSIIVSAAAVGLRDKQKENAALDKQSKILQVAGIEAKG- 59

Query: 61  SNSAIESTYSERVEQRFVNLDEGTFVEAPKPDYDMYKAAKETEYSTKVT--NSNVGFQRR 118
            +  I   +++ +E R V+ + G FVE    +YD  KAAKE   S K+T        QRR
Sbjct: 60  -SKQIVELFNKSIEPRLVDFNTGDFVEGDAANYDQRKAAKEASESIKLTAEQDKAKIQRR 118

Query: 119 PNVASVYLVRDDAGD-VSRIILPVHGSGLWDLMYGFLAVDADGQTVRELIYYQQKETPGL 177
            NV  VYLV+D  GD  S++ILPVHG+GLW +MY F+AV+ DG TV  L YY+Q ETPGL
Sbjct: 119 ANVGVVYLVKD--GDKTSKVILPVHGNGLWSMMYAFVAVETDGNTVSGLTYYEQGETPGL 176

Query: 178 GGEVQNPAWQDKWDGKELY-EDGEVAIRVVKNANP-SNPHTIDALSGATLTSNGVENTIR 235
           GGEV+NPAW+ +W GK+L+ E+ + AI++VK   P  + H +D LSGATLTSNGV+NT  
Sbjct: 177 GGEVENPAWRAQWVGKKLFDENHKPAIKIVKGGAPQGSEHGVDGLSGATLTSNGVQNTFD 236

Query: 236 YWVGEQGFGQFL 247
           +W+G+ GFG FL
Sbjct: 237 FWLGDMGFGPFL 248