Pairwise Alignments

Query, 410 a.a., Na(+)-translocating NADH-quinone reductase subunit F from Alteromonas macleodii MIT1002

Subject, 361 a.a., oxidoreductase FAD-binding subunit (RefSeq) from Shewanella loihica PV-4

 Score = 60.5 bits (145), Expect = 8e-14
 Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 18/214 (8%)

Query: 201 DIESKVDEETIRAYSMANYPEEEGIIMLNVRIATPPPNNLSLPAGKMSSYIW-SLKEGDK 259
           DIE    E   R+Y++++ P     +++ V+          +P G++S+Y+  +LK G  
Sbjct: 56  DIEG---ERVARSYTISSSPSRPYSLVVTVK---------RIPGGRVSNYLVDNLKVGHS 103

Query: 260 ATISGPFGEFFAKETE-NEMVFVGGGAGMAPMRSHIFDQLRRLKSKRKMSFWYGARSLRE 318
             +SGP G F   +   N  +F+  G+G+ PM S +   L   +    ++F + A++  +
Sbjct: 104 VNVSGPAGAFNLIDIPANRYLFLSAGSGITPMYS-MSRWLTDTQLGSDIAFVHSAKAKED 162

Query: 319 MFYTEDFDELAAENDNFEWHVALSDPQPED---NWEGYTGFIHQVLLENYLKDHPAPEDC 375
           + + E   ++A  + N     +L   +  +   + EG++ F  +  LE  +K  P   D 
Sbjct: 163 LIFHEALLKMAQRHPNMALLYSLESGESLEARASCEGFSCFDGRFNLEMLVKAVPDYLDR 222

Query: 376 EFYMCGPPMMNAAVINMLKDLGVEDENIMLDDFG 409
             ++CGP     AV  ML+D G +      + FG
Sbjct: 223 TVFVCGPEPYMQAVKAMLQDAGFDMSRYHQESFG 256



 Score = 30.8 bits (68), Expect = 7e-05
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 57  LLGALADAGYFVSSACGGGGSCGQCRVDVHSGGGEILPTELDHITKGEAREGCRLSCQVA 116
           +L  +   G  + +AC  G  CG C+  V SG  E   +E+  +T  E  +G  L+C   
Sbjct: 295 VLEGIEAKGLPIIAACRSG-VCGACKCQVLSGETES-SSEMT-LTPAEVAQGFILACSTR 351

Query: 117 IKQDMEIEL 125
           +K D+ + L
Sbjct: 352 LKSDVTLSL 360