Pairwise Alignments

Query, 341 a.a., Thiamine biosynthesis lipoprotein ApbE precursor from Alteromonas macleodii MIT1002

Subject, 275 a.a., apbE family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  113 bits (282), Expect = 6e-30
 Identities = 77/226 (34%), Positives = 122/226 (53%), Gaps = 9/226 (3%)

Query: 93  AVSPDTLTVVNEALRLANLSGGVLDVTVGPLVNLWGFGPTKRPEKVPSQTDIDDIREYVG 152
           A+  +T  +++ A +   LS G+ D++  PL+ +W F    +   +P++ DID  R  VG
Sbjct: 56  AIDEETWQLLSFAKQCFVLSNGLFDISACPLMQVWRF---TQDAILPAKVDIDAARALVG 112

Query: 153 YKKLSTTPTGLKKSHPMLYVDLSTIAKGFGVDEVA-EILENHNIENYLVEIGGEMRVKGE 211
           +++L      LK    M  +D   IAK + VD VA E+ E++   + LV  GG++     
Sbjct: 113 FERLEFNSRELKIPAGM-QLDFGGIAKEYAVDSVAYELAESYPKISVLVNFGGDIACPVA 171

Query: 212 RGDGSEWLIAIEKPVTTERAVQKVVSIGENAVATSGDYRNYYEEDGVRYSHLIDPTTGKP 271
                 W + IE P   + A  KV++I + A+ATSGD R + E DG RY H++DP TG P
Sbjct: 172 HS--VPWQVGIEDPNRLDHAA-KVLAITQGALATSGDTRRFIEVDGRRYGHIVDPRTGYP 228

Query: 272 ISHNLVSVTVIHPSSMTSDGLATAFNVMGWEQAIAVAEQE-QLAVF 316
           +S    SVTV+ P+ +T+  LAT   + G +    + EQ  Q ++F
Sbjct: 229 VSRAPRSVTVLGPNCVTAGMLATMAMLQGEQAEAFLTEQSVQFSIF 274