Pairwise Alignments

Query, 357 a.a., DNA polymerase IV from Alteromonas macleodii MIT1002

Subject, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  259 bits (663), Expect = 6e-74
 Identities = 162/361 (44%), Positives = 218/361 (60%), Gaps = 18/361 (4%)

Query: 1   MRKIIHVDMDCFYAAVEMRDNPALRDIPIAIGGSADRRGVISTCNYPARKFGVRSAMATA 60
           +RKIIH+DMD FYA+VE RDNP LR  P+A+G   + RGV++  +Y ARKFGV SAM + 
Sbjct: 16  VRKIIHIDMDAFYASVEQRDNPELRGKPVAVG-YPEARGVVAAASYEARKFGVHSAMPSV 74

Query: 61  YALKLCPNLTLVKGRMDVYATESQKIRKIFADYTDLIEPLSLDEAYLDVTNSEFCGGSAT 120
            A + CP L  V  R DVY   S++I+ IFA+YT L+EPLSLDEAYLDVT +      AT
Sbjct: 75  TAKRKCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVTENFRGLKLAT 134

Query: 121 LIAEEIRERIKNELGLTASAGVAPCKFVAKVASDENKPDGICVITPDKLDEFVREMPLKK 180
            IAEEIR RI+ E  LTASAGV+  KF+AK+ASD+ KPDG+ VITP    +FV+ +P+KK
Sbjct: 135 EIAEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKK 194

Query: 181 IPGVGKVTMQKLQRMGLNTCDDVRQYPFERIQKELGKFGSVLWERAHGIDERELSVSRER 240
             GVG  T +K++R+G+ T  D++      +Q+  GK G   +  A GIDER++   R R
Sbjct: 195 FHGVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIR 254

Query: 241 KSIGVERTLSEDIHTFEQCIDFLPHLFEKLQERMENHKKRTGKPVRIRTQGVKLKFNDF- 299
           KSIG E T  ED+H  E     L  L +K+    E         +R +T  +K+K+ DF 
Sbjct: 255 KSIGAEDTFREDVHDLETARAGLKPLIDKVWHYCE------ASGIRGKTMTLKVKWADFT 308

Query: 300 QLT---TVEHRCATLDE--AYFRTLMQEAFERATGRGIRLVGV---HIGLAADQSTQQLV 351
           Q+T   T+    A++ E       L+   F     +GIRL+GV    +    D+S  QL 
Sbjct: 309 QITRSKTIVAPIASVAEMSEIAELLLSPIF--PAPKGIRLLGVTLSSLDTVDDRSEPQLA 366

Query: 352 L 352
           L
Sbjct: 367 L 367