Pairwise Alignments

Query, 224 a.a., Rut operon repressor from Alteromonas macleodii MIT1002

Subject, 206 a.a., Transcriptional regulator RutR of pyrimidine catabolism (TetR family) from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (313), Expect = 8e-34
 Identities = 66/188 (35%), Positives = 100/188 (53%)

Query: 34  RIMDAALSLFSKNGVSGTTIEQVSELANVSKSNLLYYFKSKEGLYLSVITHLLDVWLTPL 93
           +I+ AA  +F++ G   T +  ++    + +SNL YYF +K  LY +V+  LL+VW    
Sbjct: 15  KILLAAEKVFAEKGFGSTAMADIAAEVQLPRSNLHYYFSTKSELYSAVLFDLLEVWKQDA 74

Query: 94  QSFSAEQDPIETLSDYIKVKLEMSRDNPAESKLFCMEVVQGAPLLIKELETPLKTLLDAK 153
             F    DP   LS YI+ K+  SR  P  SK++  EV+ GAP L + L+  L      K
Sbjct: 75  LCFEMFDDPRVVLSSYIRAKMNHSRSRPYGSKVWANEVIHGAPTLGEALDASLYDWAKMK 134

Query: 154 SAVIIEWIEAGKLKPVDPIHLIFSIWAITQHYADFSVQIKAVTGKDLSDPAFFESTLSNI 213
            A I +W+E  ++ P++P  L++ IWA TQHYADF  QI  +          FE  +  +
Sbjct: 135 EAKIRQWVEDKRILPIEPSSLLYMIWASTQHYADFDHQINILNDHQPLSDMQFERAVQTV 194

Query: 214 QHIILGGL 221
             +IL G+
Sbjct: 195 TSVILRGI 202