Pairwise Alignments

Query, 136 a.a., biopolymer transport protein ExbD from Alteromonas macleodii MIT1002

Subject, 134 a.a., biopolymer transporter exbD2 from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (268), Expect = 5e-29
 Identities = 60/134 (44%), Positives = 87/134 (64%), Gaps = 1/134 (0%)

Query: 1   MKRKKHTSAEDEAQIDMTPMLDIVFIMLIFFIVTTSFVKEKGLDVNRPEDNQAKNDKPSK 60
           M+  + TS ++EAQID+T MLDIVFIMLIFFIVT+SFV+E G++VNRP    A + K + 
Sbjct: 1   MRLGRRTSKQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEVNRPTAAHAVSQKQA- 59

Query: 61  ALSIRIDADGTIMMGGREVDIRRVVANAQTYLAENNTDSAAIQAHEDSEHGTVVEVMNQV 120
            + + I A   I +  R+VD+ RV A  +  L +    S  IQA E + +GTVV+VM+  
Sbjct: 60  GIFVAITAANDIYIDKRQVDVERVQATLEHLLLDQPDASLVIQADEHAFNGTVVKVMDAA 119

Query: 121 KIAGIDKVSVLVKK 134
           K AG+  +++  +K
Sbjct: 120 KGAGVKSIALAAEK 133