Pairwise Alignments

Query, 255 a.a., putative transposase OrfB from Alteromonas macleodii MIT1002

Subject, 269 a.a., ISSod1, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 21/268 (7%)

Query: 8   LSIIKEWVLYWRKY---MPKIGTRKLYTLIKPKLVEHGIKLGRDGFFTYLKSEGLLVKPK 64
           +S+ K     W K    +  + T KLY L++    +    LG       L+ EG  V   
Sbjct: 1   MSVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRY 60

Query: 65  -----------KSFTKTTFSKHWMKKHPNLLKEEGLH------NAEHVLVSDITYLESDQ 107
                      K+  +  +     +KH + + +  L+      +A  V   D+TYL++ +
Sbjct: 61  LVRKIMHRLRLKATQRCAYKVTTQRKHSDAVADNLLNMNFNPVSANQVWAGDVTYLKTGE 120

Query: 108 GVHYLSLVTDSSTRKIVGHHLSLDMRAENVVKALKMAVKDKRYAGNSVHHSDRGLQYCSA 167
           G  YL++V D  +R+IVG  +   M  + + KAL  A   ++ A   V HSDRG QY S 
Sbjct: 121 GWMYLAVVMDLYSRRIVGWRIDKRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSK 180

Query: 168 IYQNELNANGIQPSMTDGYDCYQNALAERINGILKQEFLLYRCK-TVEELKILVTESINI 226
            +   L++ GI+ SM D   C+ NA+ ER  G LK +++    + T E +K  VT  I  
Sbjct: 181 QFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVAQPTREFMKQDVTAYIKY 240

Query: 227 YNEMRPHLALDMETPNAVHNRKGQLREL 254
           YN  R H A +  +P    N + ++  L
Sbjct: 241 YNLERLHSANNDLSPVEFENSQVKVSSL 268