Pairwise Alignments

Query, 388 a.a., site-specific tyrosine recombinase XerC from Alteromonas macleodii MIT1002

Subject, 392 a.a., putative phage integrase, catalytic core from Phaeobacter inhibens DSM 17395

 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 11/169 (6%)

Query: 195 QKNRRLEEGEWEKLIQGLKEVRKSEYLQRDYALLFKLLISTGLRCSELLSIKWSDIDFTA 254
           ++ R L + E ++L   L EV +           F+LLI TG R  E+ ++KW  I  T 
Sbjct: 197 KRERYLNQNELQRLGHVLSEVEREGTETPFVVAAFRLLILTGCRLGEIQTLKWDYITDTG 256

Query: 255 SRFDVVILKQKCKFRGKAKTLPMLAETKSLLLALRP---EIYSEEQTIYQIKPQTLQSVF 311
                         +  A+ +P+    + +L  L       Y  E  +       LQ  +
Sbjct: 257 MELPDT--------KTGARRIPLPQPARDVLTHLPRTPGNPYVIEGKLAGQYATDLQHPW 308

Query: 312 TRAATQAGISGLSLHDLRTEAISRMLELGLPVPIVACFTGHRDHSTIIR 360
            R   +AG++G+ +HDLR    S  +  G+P+ +V    GH    T +R
Sbjct: 309 RRIRARAGLAGVRIHDLRHTYASNAVSSGMPIQMVGRLLGHSQIQTTMR 357