Pairwise Alignments

Query, 365 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Alteromonas macleodii MIT1002

Subject, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

 Score =  452 bits (1162), Expect = e-132
 Identities = 210/358 (58%), Positives = 283/358 (79%), Gaps = 2/358 (0%)

Query: 9   YQAQLDEKVERLTALLSPFNAPDLTVFPSQPTHYRMRAEFRVWHEGDDLFHIMFNQETKE 68
           YQAQL +K+ RL A+   ++ P+L VF S   +YRMRAEFR+WHEGDD+++IMFNQET+E
Sbjct: 11  YQAQLADKIARLKAMFVDYSMPELEVFESPVANYRMRAEFRIWHEGDDMYYIMFNQETRE 70

Query: 69  KYRVDSFPPACKAINDAMALLLKEVRPNEALRKKLFQIDYLSALSGELVISLLYHRQLDE 128
           KYRVD FP A + IND M LL+  ++ +  LR KLFQ+D+LS LSGE+++SLLYHRQL E
Sbjct: 71  KYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILVSLLYHRQLSE 130

Query: 129 KWQKAAKELKAKLEAHFPKVNIIGRARKQKLIIDNDFVIERLPVNGKEFIFKHIENSFTQ 188
           +W  AA+ LK +L      +N+IGRARK K+++D D+V+E L VNG+ +++K +ENSFTQ
Sbjct: 131 EWITAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVENLQVNGQPYVYKQVENSFTQ 190

Query: 189 PNAEVNCSMIEWALDCVKPLSGDLLEMYCGAGNFSLPLALHFDNVVGTEIAKPSVQAAQF 248
           PNA+V   M+EWA+DC +   GDLLE+YCG GNFSL LA +F+ V+ TE+AKPSV+AAQF
Sbjct: 191 PNAKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATELAKPSVEAAQF 250

Query: 249 NIEQNQLNNVKIVRLAAEEFTQAMKGERTFSRLE--GIDLSTYNFTTVLVDPPRAGLDED 306
           NI  NQ+ NV+I+R++AEEFTQAM+G+R F+RL+  G+DL +Y   T+ VDPPR+G+D D
Sbjct: 251 NIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRSGMDID 310

Query: 307 SLRMIQDYDNIVYISCNPETLAQNLELLSETHDVAQSALFDQFPFTHHIEAGVLLTRK 364
           + +M+Q Y+ I+YISCNPETL +NL++L ETH V + ALFDQFP+THH+EAGV+L RK
Sbjct: 311 TCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGVMLERK 368